Resources
Database Credentialed Access
MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation
Philip Chung, Akshay Swaminathan, Alex Goodell, Yeasul Kim, Momsen Reincke, Lichy Han, Ben Deverett, Mohammad Amin Sadeghi, Abdel badih El Ariss, Marc Ghanem, David Seong, Andrew Lee, Caitlin Coombes, Brad Bradshaw, Mahir Sufian, Hyo Jung Hong, Teresa Nguyen, Mohammad Rasouli, Komal Kamra, Mark Burbridge, James McAvoy, Roya Saffary, Stephen Parnell Ma, Dev Dash, James Xie, Ellen Wang, Cliff Schmiesing, Nigam Shah, Nima Aghaeepour
artificial intelligence clinical notes natural language processing large language models brief hospital course electronic health records long-form text chart review text reranking atomic claim hybrid retrieval clinical informatics clinical medicine fact verification retrieval-augmented generation logical atomism text embedding formal logic llm-as-a-judge llm evaluation
Published: April 9, 2025. Version: 1.0.0
Database Credentialed Access
MIMIC-III-Ext-tPatchGNN
Chenlong Yin, Weijia Zhang
Published: April 9, 2025. Version: 1.0.0
Database Credentialed Access
MIMIC-IV-Ext-BHC: Labeled Clinical Notes Dataset for Hospital Course Summarization
Asad Aali, Dave Van Veen, Yamin Arefeen, Jason Hom, Christian Bluethgen, Eduardo Pontes Reis, Sergios Gatidis, Namuun Clifford, Joseph Daws, Arash Tehrani, Jangwon Kim, Akshay Chaudhari
clinical notes natural language processing machine learning brief hospital course text summarization
Published: Feb. 3, 2025. Version: 1.2.0
Database Restricted Access
MIMIC-IV-Ext-DiReCT
Bowen Wang, Jiuyang Chang, Yiming Qian
Published: Jan. 21, 2025. Version: 1.0.0
Database Credentialed Access
MIMIC-IV-Ext-GPT-3_5-Generated-Discharge-Summaries-for-Low-Resource-Codes
Matúš Falis, Aryo Pradipta Gema, Hang Dong, Luke Daines, Siddharth Basetti, Michael Holder, Rose Penfold, Alexandra Birch, Beatrice Alex
icd coding large language model data augmentation
Published: Dec. 16, 2024. Version: 1.0.0
Database Credentialed Access
MIMIC-IV-Ext-MDS-ED: Multimodal Decision Support in the Emergency Department - a Benchmark Dataset for Diagnoses and Deterioration Prediction in Emergency Medicine
Juan Miguel Lopez Alcaraz, Nils Strodthoff
emergency department ecg benchmark diagnoses prediction deterioration prediction multimodal
Published: Sept. 12, 2024. Version: 1.0.0
Database Open Access
Image-derived cardiomegaly biomarker values for 96K chest X-rays in MIMIC-CXR/MIMIC-CXR-JPG
Benjamin Duvieusart, Felix Krones, Guy Parsons, Lionel Tarassenko, Bartlomiej W Papiez, Adam Mahdi
biomarkers mimic-cxr cpar ctr cardiomegaly
Published: Aug. 23, 2024. Version: 1.0.0
Database Credentialed Access
ReXPref-Prior: A MIMIC-CXR Preference Dataset for Reducing Hallucinated Prior Exams in Radiology Report Generation
Oishi Banerjee, Hong-Yu Zhou, Subathra Adithan, Stephen Kwak, Kay Wu, Pranav Rajpurkar
chest x-rays reinforcement learning hallucination
Published: Aug. 14, 2024. Version: 1.0.0
Model Credentialed Access
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
Sunjun Kweon, Junu Kim, Jiyoun Kim, Sujeong Im, Eunbyeol Cho, Seongsu Bae, Jungwoo Oh, Gyubok Lee, Jong Hak Moon, Seng Chan You, Seungjin Baek, Chang Hoon Han, Yoon Bin Jung, Yohan Jo, Edward Choi
clinical notes synthetic clinical notes synthetic notes asclepius open-source llm clinical llm large language model
Published: March 25, 2024. Version: 1.1.0
Database Credentialed Access
EchoNotes Structured Database derived from MIMIC-III (ECHO-NOTE2NUM)
Gloria Hyunjung Kwak, Dana Moukheiber, Mira Moukheiber, Lama Moukheiber, Sulaiman Moukheiber, Neel Butala, Leo Anthony Celi, Christina Chen
Published: Feb. 23, 2024. Version: 1.0.0