Resources
Database Credentialed Access
Annotated MIMIC-IV discharge summaries for a study on deidentification of names
Shulammite Lim, Yuxin Xiao, Alistair Johnson, Dana Moukheiber, Lama Moukheiber, Mira Moukheiber, Marzyeh Ghassemi, Tom Pollard
Published: July 5, 2023. Version: 1.0
Database Credentialed Access
EchoNotes Structured Database derived from MIMIC-III (ECHO-NOTE2NUM)
Gloria Hyunjung Kwak, Dana Moukheiber, Mira Moukheiber, Lama Moukheiber, Sulaiman Moukheiber, Neel Butala, Leo Anthony Celi, Christina Chen
Published: Feb. 23, 2024. Version: 1.0.0
Database Open Access
MIMIC-IV Clinical Database Demo
Alistair Johnson, Lucas Bulgarelli, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
mimic critical care electronic health record
Published: Jan. 31, 2023. Version: 2.2
Challenge Credentialed Access
ShAReCLEF eHealth 2013: Natural Language Processing and Information Retrieval for Clinical Care
Danielle Mowery
Published: Feb. 15, 2013. Version: 1.0
Database Restricted Access
KURIAS-ECG: a 12-lead electrocardiogram database with standardized diagnosis ontology
Hakje Yoo, Yunjin Yum, Soowan Park, Jeong Moon Lee, Moonjoung Jang, Yoojoong Kim, Jong-Ho Kim, Hyun-Joon Park, Kap Su Han, Jae Hyoung Park, Hyung Joon Joo
Published: Nov. 8, 2021. Version: 1.0
Database Credentialed Access
Deidentified Medical Text
Margaret Douglass, Bill Long, George Moody, Peter Szolovits, Li-wei Lehman, Roger Mark, Gari D. Clifford
medical text nursing notes hipaa de-identification
Published: Dec. 18, 2007. Version: 1.0
Challenge Credentialed Access
BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization
Yanjun Gao, Dmitriy Dligach, Timothy Miller, Majid Afshar
bionlp clinical natural language processing electronic health record summarization
Published: Nov. 12, 2023. Version: 2.0.0
Model Credentialed Access
Clinical BERT Models Trained on Pseudo Re-identified MIMIC-III Notes
Eric Lehman, Sarthak Jain, Karl Pichotta, Yoav Goldberg, Byron Wallace
Published: April 28, 2021. Version: 1.0.0
Database Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi
natural language processing opioid use disorder clinical notes substance use
Published: Feb. 8, 2023. Version: 1.0.0
Database Credentialed Access
RadQA: A Question Answering Dataset to Improve Comprehension of Radiology Reports
Sarvesh Soni, Kirk Roberts
electronic health records clinical notes question answering radiology reports machine reading comprehension
Published: Dec. 9, 2022. Version: 1.0.0