Resources
Model Credentialed Access
What's in a Note? Unpacking Predictive Value in Clinical Note Representations
Tristan Naumann, William Boag
Published: Jan. 7, 2018. Version: 0.1
Database Credentialed Access
MIMIC-IV-Note: Deidentified free-text clinical notes
Alistair Johnson, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
deidentification mimic critical care natural language processing clinical notes electronic health record
Published: Jan. 6, 2023. Version: 2.2
Database Credentialed Access
MIMIC-IV-Note: Deidentified free-text clinical notes
Alistair Johnson, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
deidentification mimic critical care natural language processing clinical notes electronic health record
Published: Jan. 6, 2023. Version: 2.2
Database Credentialed Access
Annotated Question-Answer Pairs for Clinical Notes in the MIMIC-III Database
Xiang Yue, Xinliang Frederick Zhang, Huan Sun
clinical question answering clinical nlp clinical reading comprehension
Published: Jan. 15, 2021. Version: 1.0.0
Software Open Access
Transformer-DeID: Deidentification of free-text clinical notes with transformers
Callandra Moore, Lucas Bulgarelli, Tom Pollard, Alistair Johnson
deidentification neural networks transformers
Published: Nov. 2, 2023. Version: 1.0.0
Database Credentialed Access
Medication Extraction Labels for MIMIC-IV-Note Clinical Database
Akshay Goel, Almog Gueta, Omry Gilon, Sofia Erell, Amir Feder
Published: Dec. 12, 2023. Version: 1.0.0
Model Credentialed Access
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
Sunjun Kweon, Junu Kim, Jiyoun Kim, Sujeong Im, Eunbyeol Cho, Seongsu Bae, Jungwoo Oh, Gyubok Lee, Jong Hak Moon, Seng Chan You, Seungjin Baek, Chang Hoon Han, Yoon Bin Jung, Yohan Jo, Edward Choi
clinical notes large language model synthetic clinical notes synthetic notes asclepius open-source llm clinical llm
Published: March 25, 2024. Version: 1.1.0
Model Credentialed Access
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
Sunjun Kweon, Junu Kim, Jiyoun Kim, Sujeong Im, Eunbyeol Cho, Seongsu Bae, Jungwoo Oh, Gyubok Lee, Jong Hak Moon, Seng Chan You, Seungjin Baek, Chang Hoon Han, Yoon Bin Jung, Yohan Jo, Edward Choi
clinical notes large language model synthetic clinical notes synthetic notes asclepius open-source llm clinical llm
Published: March 25, 2024. Version: 1.1.0
Database Credentialed Access
CHIFIR: Cytology and Histopathology Invasive Fungal Infection Reports
Vlada Rozova, Anna Khanina, Jasmine Teng, Joanne Teh, Leon Worth, Monica Slavin, karin thursky, Karin Verspoor
nlp information extraction clinical documentation invasive fungal infections
Published: Feb. 20, 2024. Version: 1.0.2
Database Credentialed Access
CORAL: expert-Curated medical Oncology Reports to Advance Language model inference
Madhumita Sushil, Vanessa Kennedy, Divneet Mandair, Brenda Miao, Travis Zack, Atul Butte
artificial intelligence electronic health records information extraction natural language processing large language models oncology
Published: Feb. 7, 2024. Version: 1.0