Resources


Database Credentialed Access

RadQA: A Question Answering Dataset to Improve Comprehension of Radiology Reports

Sarvesh Soni, Kirk Roberts

RadQA is an electronic health record question answering dataset containing clinical questions that can be answered using the Findings and Impressions sections of radiology reports

electronic health records clinical notes question answering radiology reports machine reading comprehension

Published: Dec. 9, 2022. Version: 1.0.0

Database Open Access

Gesture Recognition and Biometrics ElectroMyogram (GRABMyo)

Ning Jiang, Ashirbad Pradhan, Jiayuan He

Open-access dataset of electromyogram (EMG) recordings collected from the wrist and forearm muscles of 43 people while they performed hand gestures.

Published: Dec. 2, 2022. Version: 1.0.2

Visualize waveforms

Database Credentialed Access

CXR-PRO: MIMIC-CXR with Prior References Omitted

Vignav Ramesh, Nathan Chi, Pranav Rajpurkar

CXR-PRO is an adaptation of the MIMIC-CXR dataset (consisting of chest radiographs and their associated free-text radiology reports) with references to non-existent priors removed.

generation free-text radiology reports references to priors retrieval large language models

Published: Nov. 23, 2022. Version: 1.0.0

Database Open Access

PTB-XL, a large publicly available electrocardiography dataset

Patrick Wagner, Nils Strodthoff, Ralf-Dieter Bousseljot, Wojciech Samek, Tobias Schaeffter

The PTB-XL ECG dataset is a large dataset of 21801 clinical 12-lead ECGs from 18869 patients of 10 second length. The raw signal data has been annotated by up to two cardiologists with 71 different ECG statements and is supplemented by rich metadata.

electrocardiography ptb-xl ptb ecg

Published: Nov. 9, 2022. Version: 1.0.3

Visualize waveforms

Database Credentialed Access

Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization

Yanjun Gao, John Caskey, Timothy Miller, Brihat Sharma, Matthew Churpek, Dmitriy Dligach, Majid Afshar

We introduce a hierarchical annotation suite of tasks addressing clinical text understanding, reasoning and abstraction over evidence, and diagnosis summarization. One task is section tagging major section and the other task is diagnosis generation.

Published: Sept. 30, 2022. Version: 1.0.0

Database Open Access

VitalDB, a high-fidelity multi-parameter vital signs database in surgical patients

Hyung-Chul Lee, Chul-Woo Jung

VitalDB, a high-fidelity multi-parameter vital signs database in surgical patients

waveform anesthesia vitaldb intraoperative biosignal ecg

Published: Sept. 21, 2022. Version: 1.0.0

Database Credentialed Access

MIMIC-III Clinical Database CareVue subset

Alistair Johnson, Tom Pollard, Roger Mark

A subset of the MIMIC-III Clinical Database containing only patients admitted from 2001 - 2008.

Published: Sept. 21, 2022. Version: 1.4

Database Open Access

Indian Institute of Science Fetal Heart Sound Database (IIScFHSDB)

Amrutha Bhaskaran, Manish Arora

The IIScFHSDB has 60 fetal phonocardiography recordings obtained in a hospital setting with the objective to provide fPCG recordings with clinical noise settings for development of signal processing algorithms for FHR determination and denoising fPCG

1 fetal heart sound 2 fhr

Published: Sept. 15, 2022. Version: 1.0

Database Credentialed Access

Nosocomial Risk Datasets from MIMIC-III

Travis Goodwin

Text-based Longitudinal Data for Predicting Nosocomial Disease Risk as used by CANTRIP.

deep learning pressure injury risk prediction acute kidney injury anemia forecasting natural language processing

Published: Sept. 15, 2022. Version: 1.0

Database Restricted Access

Multimodal Physiological Monitoring During Virtual Reality Piloting Tasks

Hrishikesh Rao, Emilie Cowen, Sophia Yuditskaya, Laura Brattain, Jamie Koerner, Gregory Ciccarelli, Ronisha Carter, Vivienne Sze, Tamara Broderick, Hayley Reynolds, Kyle McAlpin, Thomas Heldt

Physiologic and flight performance data from a virtual reality task. Data for the CogPilot Data Challenge.

Published: Aug. 25, 2022. Version: 1.0.0