Featured Resources

Database Credentialed Access

MIMIC-III Clinical Database

Alistair Johnson, Tom Pollard, Roger Mark

MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012.

The databa…

natural language processing critical care machine learning intensive care clinical

Published: Sept. 4, 2016. Version: 1.4

Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in JPG format with structured labels extracted from the free-text reports.

natural language processing mimic machine learning chest x-rays radiology computer vision

Published: Aug. 2, 2019. Version: 1.0.0

Database Credentialed Access

eICU Collaborative Research Database

Tom Pollard, Alistair Johnson, Jesse Raffa, Leo Anthony Celi, Omar Badawi, Roger Mark

The eICU Collaborative Research Database is a multi-center database comprising deidentified health data associated with over 200,000 admissions to ICUs across the United States between 2014-2015. The database includes vital sign measurements, care p…

telemedicine critical care icu

Published: April 15, 2019. Version: 2.0

Database Open Access

MIT-BIH Arrhythmia Database

The MIT-BIH Arrhythmia Database contains 48 half-hour excerpts of two-channel ambulatory ECG recordings, obtained from 47 subjects studied by the BIH Arrhythmia Laboratory between 1975 and 1979. Twenty-three recordings were chosen at random from a s…

ecg arrhythmia

Published: Feb. 24, 2005. Version: 1.0.0

Visualize waveforms

Database Open Access

MIT-BIH Atrial Fibrillation Database

This database includes 25 long-term ECG recordings of human subjects with atrial fibrillation (mostly paroxysmal).

atrial fibrillation ecg

Published: Nov. 4, 2000. Version: 1.0.0

Visualize waveforms

Software Open Access

Generalized Multiscale Entropy Analysis

The method of generalized multiscale entropy (GMSE) analysis is useful for investigating complexity in physiologic signals and other series that have correlations at multiple (time) scales. It represents a generalization of the original method of mu…

entropy complexity

Published: Feb. 2, 2019. Version: 1.0.0

Latest Resources

Challenge Open Access

Early Prediction of Sepsis from Clinical Data -- the PhysioNet Computing in Cardiology Challenge 2019

Matthew Reyna, Chris Josef, Russell Jeter, Supreeth Shashikumar, Benjamin Moody, Ashish Sharma, Shamim Nemati, Gari Clifford

The 2019 PhysioNet Computing in Cardiology Challenge invites participants to predict sepsis in clinical data

prediction challenge sepsis

Published: Aug. 5, 2019. Version: 1.0.0

Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in JPG format with structured labels extracted from the free-text reports.

natural language processing mimic machine learning chest x-rays radiology computer vision

Published: Aug. 2, 2019. Version: 1.0.0

Database Open Access

Computed Tomography Images for Intracranial Hemorrhage Detection and Segmentation

Murtadha Hssayeni

Head computed tomography scans with intracranial hemmorhage segmentation.

jpg segmentation computed tomography intracranial hemmorhage

Published: Aug. 1, 2019. Version: 1.0.0

Software Open Access

Logistic Regression-HSMM-based Heart Sound Segmentation

David Springer

Heart sound segmentation code, based on a duration-dependent hidden Markov model, extended with the use of logistic regression for emission probability estimation and an enhanced Viterbi algorithm.

Published: July 29, 2019. Version: 1.0

Database Open Access

eICU Collaborative Research Database Demo

Alistair Johnson, Tom Pollard, Omar Badawi, Jesse Raffa

An openly available subset of the eICU Collaborative Research Database.

critical care eicu open data medical informatics

Published: July 15, 2019. Version: 2.0

Database Open Access

MIMIC-III Clinical Database Demo

Alistair Johnson, Tom Pollard, Roger Mark

An open source demo of the MIMIC-III Clinical Database

mimic critical care electronic health records

Published: April 24, 2019. Version: 1.4

More resources

News

Pre-conference hackathon at Computing in Cardiology 2019

News from: Early Prediction of Sepsis from Clinical Data -- the PhysioNet Computing in Cardiology Challenge 2019 v1.0.0.

July 8, 2019

Thanks to our sponsors, a pre-conference hackathon (with prize(s)) will take place on Sunday 8th September in Singapore. Registration is required. Rules and more information can be found here .

"Wild card" teams approved for the 2019 PhysioNet Challenge

News from: Early Prediction of Sepsis from Clinical Data -- the PhysioNet Computing in Cardiology Challenge 2019 v1.0.0.

June 23, 2019

Two "wild card" teams were approved for inclusion in the Challenge. We are looking forward to meeting them in Singapore!

Google Cloud credits for the PhysioNet Challenge

News from: Early Prediction of Sepsis from Clinical Data -- the PhysioNet Computing in Cardiology Challenge 2019 v1.0.0.

May 28, 2019

We are accepting requests for Google Cloud Credits ($500 per eligible team). Requests are due by 29 May, 2019. Please see here for more information on how to apply for them. Requests will be processed in order and sent on to Google. We cannot guarantee you will receive them, especially later in the competition.

Notices of acceptance have been sent for CinC abstracts

News from: Early Prediction of Sepsis from Clinical Data -- the PhysioNet Computing in Cardiology Challenge 2019 v1.0.0.

May 24, 2019

By now you should have received your acceptance or rejection notices for your abstracts. If you were rejected, please do not worry - there are two more options to compete. See here and here for more information on this.
We have added a `wild card' entry to allow one more team to enter the competition and be eligible for all the prizes. See here for more information on this.
There will be an on-site hackathon revisiting the Challenge (with a separate award) on Sunday 8th September, before the conference begins in Singapore. Any team (whether previously registered for the Challenge or not) with at least one attendee at the conference, who turns up in person to register for the Hackathon, is eligible to enter. See here for more information on this.

Scoring for the PhysioNet Challenge

News from: Early Prediction of Sepsis from Clinical Data -- the PhysioNet Computing in Cardiology Challenge 2019 v1.0.0.

May 2, 2019

Please check the leaderboard for the current Challenge scores.

More news