Featured Resources


Database Credentialed Access

MIMIC-III Clinical Database

Alistair Johnson, Tom Pollard, Roger Mark

MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012.

The databa…

natural language processing critical care machine learning intensive care clinical

Published: Sept. 4, 2016. Version: 1.4


Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in JPG format with structured labels extracted from the free-text reports.

natural language processing mimic machine learning chest x-rays radiology computer vision

Published: Aug. 2, 2019. Version: 1.0.0


Database Credentialed Access

eICU Collaborative Research Database

Tom Pollard, Alistair Johnson, Jesse Raffa, Leo Anthony Celi, Omar Badawi, Roger Mark

The eICU Collaborative Research Database is a multi-center database comprising deidentified health data associated with over 200,000 admissions to ICUs across the United States between 2014-2015. The database includes vital sign measurements, care p…

telemedicine critical care icu

Published: April 15, 2019. Version: 2.0


Database Open Access

MIT-BIH Arrhythmia Database

The MIT-BIH Arrhythmia Database contains 48 half-hour excerpts of two-channel ambulatory ECG recordings, obtained from 47 subjects studied by the BIH Arrhythmia Laboratory between 1975 and 1979. Twenty-three recordings were chosen at random from a s…

ecg arrhythmia

Published: Feb. 24, 2005. Version: 1.0.0

Visualize waveforms

Database Open Access

MIT-BIH Atrial Fibrillation Database

This database includes 25 long-term ECG recordings of human subjects with atrial fibrillation (mostly paroxysmal).

atrial fibrillation ecg

Published: Nov. 4, 2000. Version: 1.0.0

Visualize waveforms

Software Open Access

Generalized Multiscale Entropy Analysis

The method of generalized multiscale entropy (GMSE) analysis is useful for investigating complexity in physiologic signals and other series that have correlations at multiple (time) scales. It represents a generalization of the original method of mu…

entropy complexity

Published: Feb. 2, 2019. Version: 1.0.0


Latest Resources


Challenge Open Access

Early Prediction of Sepsis from Clinical Data -- the PhysioNet Computing in Cardiology Challenge 2019

Matthew Reyna, Chris Josef, Russell Jeter, Supreeth Shashikumar, Benjamin Moody, Ashish Sharma, Shamim Nemati, Gari Clifford

The 2019 PhysioNet Computing in Cardiology Challenge invites participants to predict sepsis in clinical data

prediction challenge sepsis

Published: Aug. 5, 2019. Version: 1.0.0


Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in JPG format with structured labels extracted from the free-text reports.

natural language processing mimic machine learning chest x-rays radiology computer vision

Published: Aug. 2, 2019. Version: 1.0.0


Database Open Access

Computed Tomography Images for Intracranial Hemorrhage Detection and Segmentation

Murtadha Hssayeni

Head computed tomography scans with intracranial hemmorhage segmentation.

jpg segmentation computed tomography intracranial hemmorhage

Published: Aug. 1, 2019. Version: 1.0.0


Software Open Access

Logistic Regression-HSMM-based Heart Sound Segmentation

David Springer

Heart sound segmentation code, based on a duration-dependent hidden Markov model, extended with the use of logistic regression for emission probability estimation and an enhanced Viterbi algorithm.

Published: July 29, 2019. Version: 1.0


Database Open Access

eICU Collaborative Research Database Demo

Alistair Johnson, Tom Pollard, Omar Badawi, Jesse Raffa

An openly available subset of the eICU Collaborative Research Database.

critical care eicu open data medical informatics

Published: July 15, 2019. Version: 2.0


Database Open Access

MIMIC-III Clinical Database Demo

Alistair Johnson, Tom Pollard, Roger Mark

An open source demo of the MIMIC-III Clinical Database

mimic critical care electronic health records

Published: April 24, 2019. Version: 1.4