Resources
Database Credentialed Access
MIMIC-Ext-MIMIC-CXR-VQA: A Complex, Diverse, And Large-Scale Visual Question Answering Dataset for Chest X-ray Images
Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi
question answering multimodal benchmark radiology evaluation visual question answering electronic health records deep learning chest x-ray machine learning
Published: July 19, 2024. Version: 1.0.0
Database Credentialed Access
A Temporal Dataset for Respiratory Support in Critically Ill Patients
Mira Moukheiber, Lama Moukheiber, Dana Moukheiber, Sicheng Hao, Leo Anthony Celi, Hyung-Chul Lee
oberservational data time-series
Published: May 31, 2024. Version: 1.0.0
Database Credentialed Access
MS-CXR: Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing
Benedikt Boecking, Naoto Usuyama, Shruthi Bannur, Daniel Coelho de Castro, Anton Schwaighofer, Stephanie Hyland, Maria Teodora Wetscherek, Tristan Naumann, Aditya Nori, Javier Alvarez Valle, Hoifung Poon, Ozan Oktay
vision-language processing chest x-ray
Published: May 16, 2022. Version: 0.1
Database Credentialed Access
EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images
Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi
question answering benchmark evaluation visual question answering electronic health records multi-modal question answering deep learning chest x-ray ehr question answering semantic parsing machine learning
Published: July 23, 2024. Version: 1.0.0
Database Credentialed Access
ReXPref-Prior: A MIMIC-CXR Preference Dataset for Reducing Hallucinated Prior Exams in Radiology Report Generation
Oishi Banerjee, Hong-Yu Zhou, Subathra Adithan, Stephen Kwak, Kay Wu, Pranav Rajpurkar
chest x-rays reinforcement learning hallucination
Published: Aug. 14, 2024. Version: 1.0.0
Database Credentialed Access
RadGraph2: Tracking Findings Over Time in Radiology Reports
Adam Dejl, Sameer Khanna, Patricia Therese Pile, Kibo Yoon, Steven QH Truong, Hanh Duong, Agustina Saenz, Pranav Rajpurkar
chest x-rays relation extraction disease progression information extraction radiology reports named entity recognition
Published: Aug. 8, 2024. Version: 1.0.0
Database Credentialed Access
EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images
Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi
question answering benchmark evaluation visual question answering electronic health records multi-modal question answering deep learning chest x-ray ehr question answering semantic parsing machine learning
Published: July 23, 2024. Version: 1.0.0
Model Credentialed Access
Me-LLaMA: Foundation Large Language Models for Medical Applications
Qianqian Xie, Qingyu Chen, Aokun Chen, Cheng Peng, Yan Hu, Fongci Lin, Xueqing Peng, Jimin Huang, Jeffrey Zhang, Vipina Keloth, Xinyu Zhou, Huan He, Lucila Ohno-Machado, Yonghui Wu, Hua Xu, Jiang Bian
Published: June 5, 2024. Version: 1.0.0
Model Credentialed Access
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
Sunjun Kweon, Junu Kim, Jiyoun Kim, Sujeong Im, Eunbyeol Cho, Seongsu Bae, Jungwoo Oh, Gyubok Lee, Jong Hak Moon, Seng Chan You, Seungjin Baek, Chang Hoon Han, Yoon Bin Jung, Yohan Jo, Edward Choi
clinical notes large language model synthetic clinical notes synthetic notes asclepius open-source llm clinical llm
Published: March 25, 2024. Version: 1.1.0
Software Open Access
Transformer-DeID: Deidentification of free-text clinical notes with transformers
Callandra Moore, Lucas Bulgarelli, Tom Pollard, Alistair Johnson
deidentification neural networks transformers
Published: Nov. 2, 2023. Version: 1.0.0