Resources


Software Open Access

Multiscale Entropy Analysis

The method of multiscale entropy (MSE) analysis is useful for investigating complexity in physiologic signals and other series that have correlations at multiple (time) scales.

entropy complexity

Published: Aug. 4, 2004. Version: 1.0

Software Open Access

pNNx - Time Domain Heart Rate Variability Analysis

The pNNx software package expands the analysis capabilities of the widely used pNN50 measure, providing researchers with the flexibility to test various thresholds for optimal discrimination of HRV in populations of interest.

interbeat hrv

Published: March 3, 2003. Version: 1.0.0

Software Open Access

Waveform Database Software Package (WFDB) for Python

Chen Xie, Lucas McCullum, Alistair Johnson, Tom Pollard, Brian Gow, Benjamin Moody

Tools for working with waveforms in Python.

wfdb waveform python

Published: Oct. 4, 2021. Version: 3.4.1

Database Open Access

EPHNOGRAM: A Simultaneous Electrocardiogram and Phonocardiogram Database

Arsalan Kazemnejad, Peiman Gordany, Reza Sameni

An open-access database recorded during the EPHNOGRAM project, consisting of simultaneous electrocardiogram (ECG) and phonocardiogram (PCG) recordings from young healthy adults, during stress-test experiments.

phonocardiogram stress-test electrocardiogram

Published: June 11, 2021. Version: 1.0.0

Visualize waveforms

Database Credentialed Access

Curated Data for Describing Blood Glucose Management in the Intensive Care Unit

Aldo Robles Arévalo, Roselyn Mateo-Collado, Leo Anthony Celi

The data subsets consist of time series files that includes all the curated entries of glucose readings and insulin inputs from MIMIC-III database.

critical care insulin replacement therapy glycemic control

Published: April 19, 2021. Version: 1.0.1

Database Restricted Access

Flatten: COVID-19 Survey Data on Symptoms, Demographics and Mental Health in Canada

Shrey Jain, Marie Charpignon, Mathew Samuel, Jaydeep Mistry, Nicholas Frosst, Leo Anthony Celi, Marzyeh Ghassemi

Freely accessible COVID-19 symptom dataset surveying Canadians and gathered from March to July of 2020 by the global humanitarian aid non-profit Flatten. This dataset of 294,106 surveys gathered from March 23rd to July 30th in 2020.

public health population statistics covid-19

Published: March 8, 2021. Version: 1.0

Challenge Open Access

Electrocardiographic Imaging of Myocardial Infarction - The PhysioNet Computing in Cardiology Challenge 2007

The aim of Challenge 2007 is to establish how well one can characterize the location and extent of moderate to large, relatively compact infarcts using electrocardiographic evidence (supplemented by a model of the torso geometry and conductivity), i…

imaging challenge ecg

Published: Jan. 2, 2007. Version: 1.0.0

Software Open Access

Information-Based Similarity

IBS is a novel method for comparing time series based on linguistic analysis of "word" frequency and rank order statistics. It has been applied successfully in a variety of applications, including analysis of interbeat (RR) intervals, clas…

interbeat rr interval complexity

Published: Oct. 26, 2004. Version: 1.0.0

Software Open Access

WFDB Software Package

George Moody, Tom Pollard, Benjamin Moody

The original Waveform Database Software (WFDB) Package, in C.

wfdb waveform

Published: March 26, 2021. Version: 10.6.2

Database Credentialed Access

Phenotype Annotations for Patient Notes in the MIMIC-III Database

Edward Moseley, Leo Anthony Celi, Joy Wu, Franck Dernoncourt

Clinical notes, annotated by at least two expert annotators for over ten patient phenotypes, including advanced cancer, substance abuse, and treatment non-adherence.

patient classification natural language processing

Published: March 5, 2020. Version: 1.20.03