Resources

CXR-Align is a benchmark dataset designed to evaluate vision-language processing (VLP) models' ability to accurately interpret negations in chest X-ray (CXR) reports. Negations are prevalent in medical documentation and pose significant challenges f…

Opioid related aberrant behaviors (ORAB) present novel risk factors for opioid overdose. Previously, ORAB have been mainly assessed by survey results and by monitoring drug administrations. Such methods however, cannot scale up and do not cover the …

False arrhythmia alarms are a persistent problem in intensive care units despite considerable effort from industrial and academic algorithm developers. Among the various arrhythmias, ventricular tachycardia (VT) is particularly challenging to detect…

MIMIC-III-Ext-PPG is a large-scale, annotated, and quality-assessed dataset of photoplethysmogram (PPG) segments extracted from the MIMIC-III Waveform Database Matched Subset. It contains around 6.3 million non-overlapping 30-second segments from 6,…

Breast cancer is one of the most prevalent types of cancer and the leading type of cancer death. Mammography is the recommended imaging modality for periodic breast cancer screening. A few datasets have been published to develop computer-aided tools…

This project provides MIMIC-Patient, a structured, per-patient representation of the MIMIC-III database designed for large language model (LLM)–based clinical question answering. For each of 500 admissions, we reconstruct the patient’s episode into …

Medical concept extraction from electronic health records underpins many downstream applications, yet remains challenging because medically meaningful concepts, such as diagnosis, are frequently implied rather than explicitly stated in medical narra…

Large Vision Language Models (LVLMs) have recently achieved superior performance in various tasks on natural image and text data, which inspires a large amount of studies for LVLMs fine-tuning and training. Despite their advancements, there has been…

We present a temporal benchmark dataset for clinical respiratory intervention tasks in intensive care unit (ICU) patients, derived from the MIMIC-IV v2.2 dataset. The data consists of 50,920 adult ICU patients and includes 90-day hourly ventilation …

This dataset is a curated subset of MIMIC-III (v1.4), specifically formatted to facilitate reproducibility of the experiments in the work t-PatchGNN. It serves as part of a benchmark designed for forecasting irregular multivariate clinical time seri…