Resources


Database Open Access

MIMIC-IV demo data in the OMOP Common Data Model

Michael Kallfelz, Anna Tsvetkova, Tom Pollard, et al.

Preliminary work to transform a MIMIC-IV demo dataset to the OMOP Common Data Model

omop common data model

Published: June 21, 2021. Version: 0.9

Challenge Open Access

Paroxysmal Atrial Fibrillation Events Detection from Dynamic ECG Recordings: The 4th China Physiological Signal Challenge 2021

Xingyao Wang, Caiyun Ma, Xiangyu Zhang, et al.

CPSC2021 for paroxysmal atrial fibrillation events detection.

event detection paroxysmal atrial fibrillation

Published: June 21, 2021. Version: 1.0.0

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Database Credentialed Access

CLIP: A Dataset for Extracting Action Items for Physicians from Hospital Discharge Notes

James Mullenbach, Yada Pruksachatkun, Sean Adler, et al.

Clinical action items annotated over MIMIC-III. 718 discharge summaries are labeled at a sentence- and character-level with multiple action labels including Appointment, Lab, Procedure, Medication, Imaging, Patient Instructions, and Other.

Published: June 21, 2021. Version: 1.0.0

Database Open Access

EPHNOGRAM: A Simultaneous Electrocardiogram and Phonocardiogram Database

Arsalan Kazemnejad, Peiman Gordany, Reza Sameni

An open-access database recorded during the EPHNOGRAM project, consisting of simultaneous electrocardiogram (ECG) and phonocardiogram (PCG) recordings from young healthy adults, during stress-test experiments.

stress-test phonocardiogram electrocardiogram

Published: June 11, 2021. Version: 1.0.0

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Database Open Access

Q-Pain: A Question Answering Dataset to Measure Social Bias in Pain Management

Cécile Logé, Emily Ross, David Yaw Amoah Dadey, et al.

Q-Pain, a medical QA dataset designed to enable the substitution of multiple different racial and gender "profiles" for patients and to evaluate whether bias is present when deciding whether to prescribe pain medication or not.

Published: June 11, 2021. Version: 1.0.0

Database Credentialed Access

RadGraph: Extracting Clinical Entities and Relations from Radiology Reports

Saahil Jain, Ashwin Agrawal, Adriel Saporta, et al.

RadGraph is a dataset of entities and relations in full-text chest X-ray radiology reports, which are obtained using a novel information extraction (IE) schema to capture clinically relevant information in a radiology report.

entity and relation extraction graph multi-modal natural language processing radiology

Published: June 3, 2021. Version: 1.0.0

Software Open Access

Heart Vector Origin Point Detection and Time-Coherent Median Beat Construction

Erick Andres Perez Alday, Larisa Tereshchenko

The algorithm finds the heart vector origin point and constructs the time-coherent median beat. VCG origin point is defined as the electrically quiet or isoelectric state of the heart when the heart vector does not move in 3D space.

baseline vectorcardiogram origin point heart vector signal processing electrocardiogram

Published: May 25, 2021. Version: 1.0.0

Database Open Access

Influence of the MHD effect on 12-lead and 3-lead ECGs recorded in 1T to 7T MRI scanners

Johannes W Krug Passand

ECG signals were acquired in various MRI scanners to enable the study of the magnetohydrodynamic (MHD) effect. The MHD effect, which is caused by an interaction of the blood flow and the MRI’s high static magnetic field, superimposes the ECG signal.

cardiac mri patient monitoring magnetohydrodynamic mri mhd ecg

Published: May 18, 2021. Version: 1.0.0

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Database Open Access

Two-tiered response of cardiorespiratory-cerebrovascular networks to orthostatic challenge

Andras Eke, Peter Mukli, Orestis Stylianou, et al.

Dataset comprising the following physiological signals: blood pressure, respiratory rate, blood flow velocity in the middle cerebral arteries and tissue hemoglobin concentration in the prefrontal cortex.

Published: May 17, 2021. Version: 1.0

Database Open Access

eICU Collaborative Research Database Demo

Alistair Johnson, Tom Pollard, Omar Badawi, et al.

An openly available subset of the eICU Collaborative Research Database.

eicu medical informatics critical care open data

Published: May 6, 2021. Version: 2.0.1