Resources
Database Credentialed Access
MIMIC-IV-Note: Deidentified free-text clinical notes
Alistair Johnson, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
mimic deidentification critical care electronic health record clinical notes natural language processing
Published: Jan. 6, 2023. Version: 2.2
Database Credentialed Access
Nosocomial Risk Datasets from MIMIC-III
Travis Goodwin
deep learning pressure injury risk prediction acute kidney injury anemia forecasting natural language processing
Published: Sept. 15, 2022. Version: 1.0
Database Contributor Review
BRATECA (Brazilian Tertiary Care Dataset): a Clinical Information Dataset for the Portuguese Language
Henrique Dias, Ana Helena Dias Pereira dos Ulbrich
prescriptions exams tertiary care clinical notes natural language processing
Published: July 14, 2022. Version: 1.1
Database Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi
clinical notes substance use natural language processing opioid use disorder
Published: Feb. 8, 2023. Version: 1.0.0
Database Credentialed Access
Deidentified Medical Text
Margaret Douglass, Bill Long, George Moody, Peter Szolovits, Li-wei Lehman, Roger Mark, Gari D. Clifford
medical text nursing notes de-identification hipaa
Published: Dec. 18, 2007. Version: 1.0
Database Credentialed Access
Annotated Question-Answer Pairs for Clinical Notes in the MIMIC-III Database
Xiang Yue, Xinliang Frederick Zhang, Huan Sun
clinical question answering clinical nlp clinical reading comprehension
Published: Jan. 15, 2021. Version: 1.0.0
Database Credentialed Access
MIMIC-III Clinical Database
Alistair Johnson, Tom Pollard, Roger Mark
MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012. The databas…
clinical intensive care machine learning critical care natural language processing
Published: Sept. 4, 2016. Version: 1.4
Database Credentialed Access
Phenotype Annotations for Patient Notes in the MIMIC-III Database
Edward Moseley, Leo Anthony Celi, Joy Wu, Franck Dernoncourt
patient classification natural language processing
Published: March 5, 2020. Version: 1.20.03
Database Open Access
MIMIC-IV Clinical Database Demo
Alistair Johnson, Lucas Bulgarelli, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
mimic critical care electronic health record
Published: Jan. 31, 2023. Version: 2.2
Challenge Contributor Review
BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization
Yanjun Gao, Timothy Miller, Majid Afshar, Dmitriy Dligach
clinical natural language processing bionlp electronic health record summarization
Published: Jan. 19, 2023. Version: 1.0.0