Resources


Database Credentialed Access

Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries

Melissa Poulsen, Vanessa Troiani, Philip Freda, et al.

The database contains a corpus of annotated data from the MIMIC-III Critical Care Database from a study that aimed to develop and apply an annotation schema to characterize opioid use disorder and related contextual factors.

opioid use disorder substance use natural language processing clinical notes

Published: Feb. 8, 2023. Version: 1.0.0

Database Credentialed Access

CLIP: A Dataset for Extracting Action Items for Physicians from Hospital Discharge Notes

James Mullenbach, Yada Pruksachatkun, Sean Adler, et al.

Clinical action items annotated over MIMIC-III. 718 discharge summaries are labeled at a sentence- and character-level with multiple action labels including Appointment, Lab, Procedure, Medication, Imaging, Patient Instructions, and Other.

Published: June 21, 2021. Version: 1.0.0

Model Credentialed Access

Shareable Artificial Intelligence to Extract Cancer Outcomes from Electronic Health Records for Precision Oncology Research

Kenneth Kehl, Pavel Trukhanov, Christopher Fong, et al.

The DFCI-imaging-student and DFCI-medonc-student AI models for extracting cancer outcomes from imaging reports and medical oncologist notes from electronic health records.

Published: Oct. 24, 2024. Version: 1.0.0

Database Restricted Access

Organ Retrieval and Collection of Health Information for Donation (ORCHID)

Hammaad Adam, Vinith Suriyakumar, Tom Pollard, et al.

Multi-center dataset on organ procurement in the United States

organ procurement organizations organ transplantation

Published: Sept. 29, 2025. Version: 2.1.1

Database Restricted Access

Dataset for Segmentation and Classification of Cardiac Implantable Electronic Devices in Chest X-Rays

Keno Bressem, Felix Busch, Andrei Zhukov, et al.

This dataset comprises 11,094 converted DICOM and smartphone images of Cardiac Implantable Electronic Devices (CIEDs), collected from 897 patients. It aims to facilitate the development of algorithms for CIED detection and classification.

chest x-ray radiology cardiac implantable electronic devices medical imaging

Published: March 4, 2025. Version: 1.0.0