Resources

138 results for "annotated"

Database Open Access

The CirCor DigiScope Phonocardiogram Dataset

Jorge Oliveira, Francesco Renna, Paulo Costa, et al.

A total number of 5272 heart sound recordings were collected from the main four auscultation locations of 1568 subjects, aged between 0 and 21 years (mean ± STD = 6.1 ± 4.3 years), with a duration between 4.8 to 80.4 seconds (mean ± STD = 22.9 ± 7.4…
signal processing murmur pitch george b moody physionet challenge 2022 murmur grading murmur location murmur timing phonocardiogram pregnant murmur shape murmur detection murmur intensity murmur quality pediatric
Published: May 10, 2022. Version: 1.0.3 | Visualize waveforms
Database Restricted Access

InReDD-Dataset-PAN924-Ext-BoneLoss-769

Thiago Alves Vieira de Matos, João Donato Bauman, Maria Julia Ramos, et al.

InReDD-Dataset-PAN924-Ext-BoneLoss-769 is a restricted-access extension of InReDD-Dataset-PAN924 containing 769 panoramic dental radiographs and 21,047 geometric annotations in a single COCO-compatible JSON file. It provides 18,792 tooth-crown polyg…
computer-aided diagnosis medical imaging alveolar ridge dentistry tooth segmentation maxilla coco format crown segmentation panoramic radiograph mandible deep learning instance segmentation dental radiograph periodontal bone loss periodontitis oral health
Published: Sept. 17, 2026. Version: 1.0.0
Database Credentialed Access

MIMIC-III-Ext-PPG: A PPG Benchmark Dataset for Cardiorespiratory Analysis

Mohammad Moulaeifard, Peter H Charlton, Nils Strodthoff

MIMIC-III-Ext-PPG is a large-scale, annotated, and quality-assessed dataset of photoplethysmogram (PPG) segments extracted from the MIMIC-III Waveform Database Matched Subset. It contains around 6.3 million non-overlapping 30-second segments from 6,…
blood pressure critical care photoplethysmography heart rhythm respiratory rate signal quality electrocardiogram
Published: March 17, 2026. Version: 1.1.0
Database Open Access

Leipzig Heart Center ECG-Database: Arrhythmias in Children and Patients with Congenital Heart Disease

Sophia Klehs, Daniel Franke, Bayhas Alhamad, et al.

Interpretation of Electrocardiograms (ECG) is increasingly complemented by algorithms. These algorithms are based on large datasets. This ECG database consists of children and adults with congenital heart defects (CHD) including many arrhythmia anno…
12-lead arrhythmias chd intracardiac recordings annotated congenital heart disease ecg artificial intelligence
Published: March 19, 2025. Version: 1.0.0 | Visualize waveforms
Database Credentialed Access

Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization

Yanjun Gao, John Caskey, Timothy Miller, et al.

Applying methods in natural language processing on electronic health records (EHR) data is a growing field. Existing corpus and annotation focus on modelling textual features and relation prediction [1] . However, there is a paucity of annotated cor…
Published: Sept. 30, 2022. Version: 1.0.0
Database Credentialed Access

CLIP: A Dataset for Extracting Action Items for Physicians from Hospital Discharge Notes

James Mullenbach, Yada Pruksachatkun, Sean Adler, et al.

We created a dataset of clinical action items annotated over MIMIC-III. This dataset, which we call CLIP, is annotated by physicians and covers 718 discharge summaries, representing 107,494 sentences. Annotations were collected as character-level sp…
Published: June 21, 2021. Version: 1.0.0
Database Credentialed Access

RadGraph: Extracting Clinical Entities and Relations from Radiology Reports

Saahil Jain, Ashwin Agrawal, Adriel Saporta, et al.

RadGraph is a dataset of entities and relations in full-text radiology reports. We designed a novel information extraction (IE) schema to structure clinical information in a radiology report with four entities and three relations. Our train set cons…
entity and relation extraction graph multi-modal natural language processing radiology
Published: June 3, 2021. Version: 1.0.0
Database Credentialed Access

MIMIC-IV-Ext-EntityCoding: Clinical Named Entity Recognition and Assertion Classification Dataset for ICD Coding

James C Douglas, Yidong Gan, Ben Hachey, et al.

This dataset provides clinical Named Entity Recognition (NER) and Assertion Classification (AC) annotations for 400 discharge summaries from MIMIC-IV-Note (v2.2), designed to support research on computer-assisted ICD coding and related clinical natu…
clinical nlp clinical annotation named entity recognition discharge summary clinical coding assertion classification
Published: Sept. 23, 2026. Version: 1.0.0
Database Open Access

VTaC: A Benchmark Dataset of Ventricular Tachycardia Alarms from ICU Monitors

Li-wei Lehman, Benjamin Moody, Lucas McCullum, et al.

False arrhythmia alarms are a persistent problem in intensive care units despite considerable effort from industrial and academic algorithm developers. Among the various arrhythmias, ventricular tachycardia (VT) is particularly challenging to detect…
arrhythmia ventricular tachycardia icu false alarms benchmark dataset machine learning
Published: Sept. 14, 2026. Version: 1.1 | Visualize waveforms
Database Credentialed Access

MIMIC-IV-Ext-MedicalBench: Evaluating Large Language Models Towards Improved Medical Concept Extraction

Zhichao Yang, Gregory Lyng, Sanjit Batra, et al.

Medical concept extraction from electronic health records underpins many downstream applications, yet remains challenging because medically meaningful concepts, such as diagnosis, are frequently implied rather than explicitly stated in medical narra…
Published: March 23, 2026. Version: 1.0.0