Resources
53 results for "benchmark"
Database
Open Access
MIMIC-IV Clinical Database Demo on FHIR
Interoperability of healthcare data has become increasingly important given the increase in deployment of data driven algorithms in clinical settings. The Fast Healthcare Interoperability Resources (FHIR) standard has emerged as a promising mechanis…
Database
Restricted Access
Swiss-Mammo: A physician-written, synthetic dataset of German mammography reports
This dataset, Swiss-Mammo, contains 28 manually constructed German mammography reports, each paired with an English translation. The reports are stratified across BI-RADS categories 0 through 6, with four reports per category. All reports were manua…
Database
Credentialed Access
Medical-CXR-VQA dataset: A Large-Scale LLM-Enhanced Medical Dataset for Visual Question Answering on Chest X-Ray Images
Medical Visual Question Answering (VQA) is an important task in medical multi-modal Large Language Models (LLMs), aiming to answer clinically relevant questions regarding input medical images. This technique has the potential to improve the efficien…
Database
Credentialed Access
ReXPref-Prior: A MIMIC-CXR Preference Dataset for Reducing Hallucinated Prior Exams in Radiology Report Generation
Generative vision-language models have exciting potential implications for radiology report generation, but unfortunately such models are also known to produce hallucinations and other nonsensical statements. For example, radiology report generation…
Database
Credentialed Access
RadGraph2: Tracking Findings Over Time in Radiology Reports
RadGraph2 is a dataset of 800 chest radiology reports annotated using a fine-grained entity-relationship schema, which is an expanded version of the previously introduced RadGraph dataset. In contrast with the previous approaches and the original Ra…
Database
Credentialed Access
EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images
Electronic Health Records (EHRs), which contain patients' medical histories in various multi-modal formats, often overlook the potential for joint reasoning across imaging and table modalities underexplored in current EHR Question Answering (QA) sys…
Model
Credentialed Access
Me-LLaMA: Foundation Large Language Models for Medical Applications
Recent advancements in large language models (LLMs) such as ChatGPT and LLaMA have hinted at their potential to revolutionize medical applications, yet their application in clinical settings often reveals limitations due to a lack of specialized tra…
Model
Credentialed Access
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
The development of large language models tailored for handling patients’ clinical notes is often hindered by the limited accessibility and usability of these notes due to strict privacy regulations. To address these challenges, we first create synth…
Software
Open Access
Transformer-DeID: Deidentification of free-text clinical notes with transformers
Sharing patient data such as clinical notes among clinicians and researchers is fundamental to advancements in clinical practice and biomedical research. Prior to distribution, it is often necessary and legally mandated to remove identifiers such as…
Database
Credentialed Access
ReFiSco: Report Fix and Score Dataset for Radiology Report Generation
Automated generation of clinically accurate radiology reports can improve patient care. In order to improve automatic report generation, it is helpful to understand what types of errors are common in generated reports. Thus, we introduce the Report …