Resources


Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in DICOM format with associated free-text reports.

mimic chest x-rays computer vision radiology machine learning natural language processing

Published: Sept. 19, 2019. Version: 2.0.0


Database Credentialed Access

Eye Gaze Data for Chest X-rays

Alexandros Karargyris, Satyananda Kashyap, Ismini Lourentzou, Joy Wu, Matthew Tong, Arjun Sharma, Shafiq Abedin, David Beymer, Vandana Mukherjee, Elizabeth Krupinski, Mehdi Moradi

This dataset was a collected using an eye tracking system while a radiologist interpreted and read 1,083 public CXR images. The dataset contains the following aligned modalities: image, transcribed report text, dictation audio and eye gaze data.

chest audio convolutional network eye tracking radiology multimodal explainability heatmap chest x-ray cxr deep learning machine learning

Published: Sept. 12, 2020. Version: 1.0.0


Database Credentialed Access

MIMIC-CXR-JPG - chest radiographs with structured labels

Alistair Johnson, Matt Lungren, Yifan Peng, Zhiyong Lu, Roger Mark, Seth Berkowitz, Steven Horng

Chest x-rays in JPG format with structured labels derived from the associated radiology report.

mimic computer vision radiology chest x-ray deep learning

Published: Nov. 14, 2019. Version: 2.0.0


Database Open Access

MIMIC Database

The MIMIC Database includes data recorded from over 90 ICU patients. The data in each case include signals and periodic measurements obtained from a bedside monitor as well as clinical data obtained from the patient's medical record. The recordiā€¦

mimic health record ehr icu critical care

Published: March 15, 2000. Version: 1.0.0

Visualize waveforms

Database Credentialed Access

MIMIC-III Clinical Database

Alistair Johnson, Tom Pollard, Roger Mark

MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012. The databasā€¦

clinical intensive care machine learning natural language processing critical care

Published: Sept. 4, 2016. Version: 1.4


Database Credentialed Access

MIMIC-IV

Alistair Johnson, Lucas Bulgarelli, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark

Database of patients admitted to the Beth Israel Deaconess Medical Center

mimic intensive care unit machine learning critical care

Published: Aug. 13, 2020. Version: 0.4


Database Credentialed Access

MIMIC-III - SequenceExamples for TensorFlow modeling

Jonas Kemp, Kun Zhang, Andrew Dai

MIMIC-III data converted into TensorFlow SequenceExample format, for use in modeling pipelines.

deep learning tensorflow sequence modeling machine learning

Published: Sept. 29, 2020. Version: 1.0.0


Database Open Access

MIMIC-III Clinical Database Demo

Alistair Johnson, Tom Pollard, Roger Mark

An open source demo of the MIMIC-III Clinical Database

mimic electronic health records critical care

Published: April 24, 2019. Version: 1.4


Challenge Open Access

2018 IEEE BHI and BSN Data Challenge

Tom Pollard, Alistair Johnson, Jesse Raffa

A challenge to explore real clinical questions in critically ill patients using the MIMIC. A collaboration with the IEEE Conference on Biomedical and Health Informatics 2018 and the IEEE Conference on Body Sensor Networks.

mimic weekend effect ieee challenge

Published: Feb. 5, 2018. Version: 1.0


Database Credentialed Access

Annotated Question-Answer Pairs for Clinical Notes in the MIMIC-III Database

Xiang Yue, Xinliang Frederick Zhang, Huan Sun

Annotated Question Answering Pairs for Clinical Notes in the MIMIC-III Database

clinical question answering clinical nlp clinical reading comprehension

Published: Jan. 15, 2021. Version: 1.0.0