Resources
156 results for "MIMIC"
Challenge
Credentialed Access
MIT Critical Datathon 2023: a MIMIC-IV Derived Dataset for Pulse Oximetry Correction Models
Pulse oximeters are medical devices used to assess peripheral arterial oxygen saturation ( S p O 2 SpO_2 ) noninvasively. In contrast, the "gold standard" requires arterial blood to be drawn to measure the arterial oxygen saturation ( S a O…
Database
Credentialed Access
Generalized Image Embeddings for the MIMIC Chest X-Ray dataset
This database contains image embeddings from the DICOM images of the MIMIC V2.0.0 Chest X-Ray database, generated using the approach described in “Simplified Transfer Learning for Chest Radiography Models Using Less Data”. The image embeddings are c…
Database
Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Opioid use disorder (OUD) is underdiagnosed in health system settings, limiting research on OUD using electronic health records (EHRs). Medical encounter notes can enrich structured EHR data with documented signs and symptoms of OUD and social risks…
Model
Credentialed Access
Clinical-T5: Large Language Models Built Using MIMIC Clinical Text
Recent advances in scaling large language models (LLMs) has resulted in significant improvements over a number of natural language processing benchmarks. There has been some work to pretrain these language models over clinical text. These works demo…
Database
Credentialed Access
Nosocomial Risk Datasets from MIMIC-III
Reliable longitudinal risk prediction for hospitalized patients is needed to provide quality care. Our goal is to foster the development of generalizable models capable of leveraging clinical notes to predict healthcare-associated diseases 24–96 hou…
Database
Credentialed Access
Chest X-ray segmentation images based on MIMIC-CXR
As more and more artificial intelligence (AI) or deep learning technologies have been applied to medical image applications such as radiological finding identification in chest X-rays (CXRs), the interpretability of the prediction model is crucial f…
Database
Credentialed Access
Synthetic Acute Hypotension and Sepsis Datasets Based on MIMIC-III and Published as Part of the Health Gym Project
These two synthetic datasets comprise vital signs, laboratory test results, administered fluid boluses and vasopressors for 3,910 patients with acute hypotension and for 2,164 patients with sepsis in the Intensive Care Unit (ICU). The patient cohort…
Model
Credentialed Access
Clinical BERT Models Trained on Pseudo Re-identified MIMIC-III Notes
This project contains the weights of 7 different BERT models trained over a surrogate re-identified set of MIMIC-III (v1.4) notes. Each model is suitable for direct compatibility with the HuggingFace framework; users can easily load and apply the mo…
Database
Credentialed Access
National Institutes of Health Stroke Scale (NIHSS) Annotations for the MIMIC-III Database
The National Institutes of Health Stroke Scale (NIHSS) is a 15-item neurologic examination stroke scale. It quantifies the physical manifestations of neurological deficits and provides crucial support for clinical decision making and early-stage eme…
Database
Credentialed Access
Annotated Question-Answer Pairs for Clinical Notes in the MIMIC-III Database
Clinical question answering (QA) (or reading comprehension) aims to automatically answer questions from medical professionals based on clinical texts. We release this dataset, which contains 1287 annotated QA pairs on 36 sampled discharge summaries …