Database Open Access

Surrogate Data with Correlations, Trends, and Nonstationarities

The data in this collection include: (1) 6 surrogate stationary signals with different correlations; (2) 7 surrogate correlated signals with linear, sinusoidal and power-law trends; and (3) 15 surrogate correlated signals with different types of non…

Published: March 7, 2003. Version: 1.0.0

Model Credentialed Access

Transformer models trained on MIMIC-III to generate synthetic patient notes

Ali Amin-Nejad, Julia Ive, Sumithra Velupillai

Machine learning models that have been trained using MIMIC-III to enable the creation of synthetic discharge summaries.

Published: May 27, 2020. Version: 1.0.0

Challenge Open Access

Classification of 12-lead ECGs: the PhysioNet - Computing in Cardiology Challenge 2020

Erick Andres Perez Alday, Annie Gu, Amit Shah, Chengyu Liu, Ashish Sharma, Salman Seyedi, Ali Bahrami Rad, Matthew Reyna, Gari Clifford

The goal of the 2020 PhysioNet - Computing in Cardiology Challenge is to design and implement a working, open-source algorithm that can automatically identify cardiac abnormalities in 12-lead ECG recordings.

Published: April 23, 2020. Version: 1.0.1

Database Open Access

Visceral adipose tissue measurements during pregnancy

Alexandre da Silva Rocha, Lisia von Diemen, Daniela Kretzer, Salete Matos, Juliana Rombaldi Bernardi, José Antônio Magalhães

Maternal visceral adipose tissue measurements collected as part of a cohort study of 154 pregnant women.

Published: March 23, 2020. Version: 1.0.0

Database Open Access

Complex Upper-Limb Movements

The Complex Upper-Limb Movements database contains hand trajectory data collected from ten subjects as they performed various upper-limb motor tasks. The data was used in the above-referenced manuscript to identify the motor primitives contributing …


Published: Aug. 30, 2018. Version: 1.0.0

Challenge Credentialed Access

ShAReCLEF eHealth 2013: Natural Language Processing and Information Retrieval for Clinical Care

Danielle Mowery

2013 ShARe/CLEF eHealth Evaluation Lab: Natural Language Processing and Information Retrieval for Clinical Care (Tasks 1 and 2).

natural language processing

Published: Feb. 15, 2013. Version: 1.0

Software Open Access

Software for generating the PhysioBank Index

The software in this directory generates the PhysioBank Index. On the master PhysioNet server, the script make-pbi is run nightly; if any of the constituent data collections have been updated more recently than the Index, the corresponding segments …

Published: Feb. 6, 2012. Version: 1.0.0

Software Open Access


The WFDB SWIG Toolbox for MATLAB is a collection of applications for reading, writing, manipulating, and plotting PhysioBank data, implemented as functions in MATLAB.


Published: Aug. 17, 2009. Version: 1.0.0

Software Open Access

TWAnalyser - A T-wave Alternans Detector

This software suite consists of Matlab implementations of the widely used Spectral Method (SM) and Modified Moving Average (MMA) for T-wave alternans (TWA) detection. It was initially developed for the PhysioNet/CinC Challenge 2008, in which these a…


Published: Nov. 18, 2008. Version: 1.0.0

Software Open Access

Puka - Software for Detection of Breaths in Strain Gauge Recordings

Puka calculates descriptive statistics such as heart rate variability (HRV), peak-valley respiratory sinus arrhythmia (RSA), and respiratory variables from EKG and strain gauge respiration data.

Published: Dec. 15, 2004. Version: 1.0.0