Resources


Database Credentialed Access

Deidentified Medical Text

Margaret Douglass, Bill Long, George Moody, Peter Szolovits, Li-wei Lehman, Roger Mark, Gari D. Clifford

Gold standard corpus of 2,434 deidentified nursing notes

medical text nursing notes de-identification hipaa

Published: Dec. 18, 2007. Version: 1.0


Software Open Access

record - An application for capturing data from an HP CMS (Merlin) monitor

record is an MS-DOS application that determines what signals and measurements are available from a Hewlett-Packard (Agilent/Philips) Merlin (a.k.a. CMS or Component Monitoring System) patient monitor, and then logs all of the available data to disk …

monitor mimic

Published: June 9, 2003. Version: 1.0.0


Software Open Access

A practical method for calculating Lyapunov exponents from small data sets

Detecting the presence of chaos in a dynamical system is an important problem that is solved by measuring the largest Lyapunov exponent. Lyapunov exponents quantify the exponential divergence of initially close state-space trajectories and estimate …

chaos complexity

Published: Jan. 16, 2001. Version: 1.0.0


Database Open Access

Santa Fe Time Series Competition Data Set B

This is a multivariate data set recorded from a patient in the sleep laboratory of the Beth Israel Hospital (now the Beth Israel Deaconess Medical Center) in Boston, Massachusetts. This data set was extracted from record slp60 of the MIT-BIH Polysom…

sleep multiparameter

Published: Jan. 6, 2000. Version: 1.0.0


Software Open Access

Waveform Database Software Package (WFDB) for Python

Chen Xie, Lucas McCullum, Alistair Johnson, Tom Pollard, Brian Gow, Benjamin Moody

Tools for working with waveforms in Python.

wfdb waveform python

Published: Aug. 9, 2022. Version: 4.0.0


Database Open Access

MIMIC-IV Clinical Database Demo on FHIR

Alex Bennett, Joshua Wiedekopf, Hannes Ulrich, Alistair Johnson

MIMIC-IV-on-FHIR is a hundred patient demo of MIMIC-IV v2.0 in the Fast Healthcare Interoperability Resources(FHIR) format. MIMIC-IV-on-FHIR provides implementers with a real-world FHIR datastore to aid in FHIR research and development.

mimic electronic health records fhir

Published: June 7, 2022. Version: 2.0


Database Credentialed Access

RuMedNLI: A Russian Natural Language Inference Dataset For The Clinical Domain

Pavel Blinov, Aleksandr Nesterov, Galina Zubkova, Arina Reshetnikova, Vladimir Kokh, Chaitanya Shivade

RuMedNLI is the full counterpart dataset of MedNLI in Russian language.

natural language inference recognizing textual entailment russian language

Published: April 1, 2022. Version: 1.0.0


Database Open Access

EPHNOGRAM: A Simultaneous Electrocardiogram and Phonocardiogram Database

Arsalan Kazemnejad, Peiman Gordany, Reza Sameni

An open-access database recorded during the EPHNOGRAM project, consisting of simultaneous electrocardiogram (ECG) and phonocardiogram (PCG) recordings from young healthy adults, during stress-test experiments.

stress-test electrocardiogram phonocardiogram

Published: June 11, 2021. Version: 1.0.0

Visualize waveforms

Database Credentialed Access

MIMIC-III and eICU-CRD: Feature Representation by FIDDLE Preprocessing

Shengpu Tang, Parmida Davarmanesh, Yanmeng Song, Danai Koutra, Michael Sjoding, Jenna Wiens

Features and labels from MIMIC-III and eICU-CRD produced by FIDDLE, an EHR preprocessing pipeline.

preprocessing machine learning electronic health record

Published: April 28, 2021. Version: 1.0.0


Database Credentialed Access

Annotated Question-Answer Pairs for Clinical Notes in the MIMIC-III Database

Xiang Yue, Xinliang Frederick Zhang, Huan Sun

Annotated Question Answering Pairs for Clinical Notes in the MIMIC-III Database

clinical question answering clinical nlp clinical reading comprehension

Published: Jan. 15, 2021. Version: 1.0.0