Resources


Database Credentialed Access

Eye Gaze Data for Chest X-rays

Alexandros Karargyris, Satyananda Kashyap, Ismini Lourentzou, Joy Wu, Matthew Tong, Arjun Sharma, Shafiq Abedin, David Beymer, Vandana Mukherjee, Elizabeth Krupinski, Mehdi Moradi

This dataset was a collected using an eye tracking system while a radiologist interpreted and read 1,083 public CXR images. The dataset contains the following aligned modalities: image, transcribed report text, dictation audio and eye gaze data.

audio convolutional network heatmap eye tracking machine learning multimodal radiology chest x-ray explainability chest cxr deep learning

Published: Sept. 12, 2020. Version: 1.0.0


Database Open Access

Labeled raw accelerometry data captured during walking, stair climbing and driving

Marta Karas, Jacek Urbanek, Ciprian Crainiceanu, Jaroslaw Harezlak, William Fadel

Labeled raw accelerometry data collected during outdoor walking, stair climbing, and driving for 32 healthy adults. Data were collected simultaneously at four body locations: left wrist, left hip, both ankles.

accelerometry actigraph accelerometers walking activity physical activity activity monitor driving activity raw accelerometry data activity meter activity recognition accelerometer

Published: June 26, 2021. Version: 1.0.0


Database Restricted Access

REFLACX: Reports and eye-tracking data for localization of abnormalities in chest x-rays

Ricardo Bigolin Lanfredi, Mingyuan Zhang, William Auffermann, Jessica Chan, Phuong-Anh Duong, Vivek Srikumar, Trafton Drew, Joyce Schroeder, Tolga Tasdizen

This dataset contains 3032 cases of eye-tracking data collected while five radiologists dictated reports for frontal chest x-rays, synchronized timestamped dictation transcription, and manual labels for validation of localization of abnormalities.

computer vision eye tracking radiology report machine learning chest x-rays radiology reflacx fixations gaze deep learning

Published: Sept. 27, 2021. Version: 1.0.0


Database Credentialed Access

Chest ImaGenome Dataset

Joy Wu, Nkechinyere Agu, Ismini Lourentzou, Arjun Sharma, Joseph Paguio, Jasper Seth Yao, Edward Christopher Dee, William Mitchell, Satyananda Kashyap, Andrea Giovannini, Leo Anthony Celi, Tanveer Syeda-Mahmood, Mehdi Moradi

The Chest ImaGenome dataset is a scene graph dataset with additional chronological comparison relations for chest X-rays. It is automatically derived from the MIMIC-CXR dataset. A manually annotated gold standard is also available for 500 patients.

machine learning multimodal radiology chest x-ray scene graph visual question answering visual dialogue object detection semantic reasoning bounding box relation extraction knowledge graph explainability reasoning chest cxr deep learning disease progression

Published: July 13, 2021. Version: 1.0.0


Database Credentialed Access

NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data

Harlin Lee, Boyue Li, Yungui Huang, Yuejie Chi, Simon Lin

The NCH Sleep DataBank includes 3,984 pediatric sleep studies on 3,673 unique patients conducted at Nationwide Children's Hospital between 2017 and 2019. It contains polysomnography (PSG), clinical annotations, and longitudinal clinical data.

eeg ehr polysomnography pediatrics clinical decision support sleep disorders sleep study electronic health records ecg

Published: Oct. 27, 2021. Version: 3.1.0


Challenge Restricted Access

WiDS (Women in Data Science) Datathon 2020: ICU Mortality Prediction

Meredith Lee, Jesse Raffa, Marzyeh Ghassemi, Tom Pollard, Sharada Kalanidhi, Omar Badawi, Karen Matthys, Leo Anthony Celi

WiDS (Women in Data Science) Datathon 2020: ICU Mortality Prediction focuses on patient health. Join a team, explore the data, and share your insights: http://bit.ly/WiDSdatathon2020

mortality risk data science kaggle challenge icu predictive analytics women in data science

Published: Jan. 22, 2020. Version: 1.0.0


Database Open Access

Wearable-based signals during physical exercises from patients with frailty after open-heart surgery

Daivaras Sokas, Monika Butkuvienė, Egle Tamulevičiūtė-Prascienė, Aurelija Beigienė, Raimondas Kubilius, Andrius Petrėnas, Birutė Paliakaitė

A data collection contains a wearable-based electrocardiogram and triaxial acceleration signals of 80 elderly patients with frailty after an open-heart surgery. The signals were collected while the patients were performing a series of exercise tests.

aging heart rate response frailty posture veloergometry timed up and go stair climbing physical exercise wearable heart rate reserve rehabilitation heart rate accelerometer gait electrocardiogram walk test balance

Published: March 31, 2022. Version: 1.0.0

Visualize waveforms

Database Open Access

Pulse Transit Time PPG Dataset

Philip Mehrgardt, Matloob Khushi, Simon Poon, Anusha Withana

Time synchronised multi-site PPG dataset for PTT including sensors’ attachment pressures, temperatures, inertial data from accelerometer and gyroscope, annotated ECG data, blood pressures, as well as blood oxygenation saturation levels (SpO2)

blood pressure finger attachment pressure ptt imu spo2 gyroscope attachment force pulse transit time ppg accelerometer ecg

Published: March 18, 2022. Version: 1.1.0

Visualize waveforms

Database Open Access

Eye Tracking Dataset for the 12-Lead Electrocardiogram Interpretation of Medical Practitioners and Students

Mohammed Tahri Sqalli, Dena Al-Thani, Mohamed Elshazly, Mohammed Al-Hijji

The project aims at collecting a dataset using eye-tracking technology to understand the 12-lead electrocardiogram interpretation visual behavior for medical practitioners and students with different expertise levels.

human vision medical students ecg interpretation medical image interpretation medical practice medical education human-computer interaction eye-tracking medical practitioners visual expertise electrocardiogram ecg

Published: March 16, 2022. Version: 1.0.0


Database Open Access

CPAP Pressure and Flow Data from a Local Trial of 30 Adults at the University of Canterbury

Ella Guy, Jennifer Knopp, Geoff Chase

A pressure and flow dataset was collected from a trial of 30 adults at the University of Canterbury undergoing CPAP therapy for a variety of instructed breath rates at PEEP levels of 4cmH2O and 7cmH2O.

peep cpap respiratory mechanics pulmonary mechanics respiratory modelling biomedical engineering

Published: March 24, 2022. Version: 1.0.1