PhysioNet Index

Model Credentialed Access

Clinical BERT Models Trained on Pseudo Re-identified MIMIC-III Notes

Eric Lehman, Sarthak Jain, Karl Pichotta, Yoav Goldberg, Byron Wallace

We explore recovering sensitive info from BERT trained over non-deidentified EHR. We make our models and data available to further facilitate research.

Published: April 28, 2021. Version: 1.0.0

Database Open Access

Effect of 24-hour sleep deprivation on cerebral hemodynamics and cognitive performance

Peter Mukli, Andriy Yabluchanskiy, Tamas Csipo

We assessed the impact of 24-hour sleep deprivation on the global properties of frontal lobe functional networks and on cognitive performance. fNIRS measurements were carried out in the resting state and in response to a finger-tapping paradigm.

Published: April 26, 2021. Version: 1.0.0

Database Open Access

Mental workload during n-back task captured by TransCranial Doppler (TCD) sonography and functional Near-Infrared Spectroscopy (fNIRS) monitoring

Peter Mukli, Andriy Yabluchanskiy, Tamas Csipo

Functional near-infrared spectroscopy and transcranial doppler sonography were used to measure changes in cerebral hemodynamics during cognitive stimulation.

Published: April 21, 2021. Version: 1.0

Database Credentialed Access

Curated Data for Describing Blood Glucose Management in the Intensive Care Unit

Aldo Robles Arévalo, Roselyn Mateo-Collado, Leo Anthony Celi

The data subsets consist of time series files that includes all the curated entries of glucose readings and insulin inputs from MIMIC-III database.

insulin replacement therapy glycemic control critical care

Published: April 19, 2021. Version: 1.0.1

Database Credentialed Access

Annotated Question-Answer Pairs for Clinical Notes in the MIMIC-III Database

Xiang Yue, Xinliang Frederick Zhang, Huan Sun

Annotated Question Answering Pairs for Clinical Notes in the MIMIC-III Database

clinical question answering clinical nlp clinical reading comprehension

Published: Jan. 15, 2021. Version: 1.0.0

Database Open Access

Shiraz University Fetal Heart Sounds Database

Reza Sameni, Maryam Samieinasab

The Shiraz University (SU) fetal heart sounds database (SUFHSDB) contains fetal and maternal phonocardiogram (PCG) recordings from 109 pregnant women in single and twin pregnancies.

pregnancy phonocardiography fetal cardiography cardiotocography

Published: Jan. 8, 2021. Version: 1.0.1

Visualize waveforms

Database Open Access