Resources
30 results for "open-source"
Database
Restricted Access
MIMIC-III-Ext-Synthetic-Clinical-Trial-Questions
Large-language models (LLMs) show promise for extracting information from clinical notes. Deploying these models at scale can be challenging due to high computational costs, regulatory constraints, and privacy concerns. To address these challenges, …
Database
Open Access
SHDB-AF: a Japanese Holter ECG database of atrial fibrillation
Saitama Heart Database Atrial Fibrillation (SHDB-AF) is a novel open-sourced Holter ECG database from Japan, containing data from 122 unique subjects with paroxysmal atrial fibrillation. Among the 128 recordings, 98 contain raw ECG data with rhythm …
Database
Restricted Access
Application of Med-PaLM 2 in the refinement of MIMIC-CXR labels
MIMIC-CXR is a large, open source dataset that is widely-used in medical AI research. One of the limitations of this dataset is the lack of ground truth labels for the chest X-ray studies. Prior work has extracted structured labels from the MIMIC-CX…
Database
Credentialed Access
Northwestern ICU (NWICU) database
Retrospective medical data collection is essential for advancing patient care, offering insights and supporting the development of health technology. The Medical Information Mart for Intensive Care (MIMIC)-III database has been instrumental in provi…
Model
Credentialed Access
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
The development of large language models tailored for handling patients’ clinical notes is often hindered by the limited accessibility and usability of these notes due to strict privacy regulations. To address these challenges, we first create synth…
Database
Open Access
Patient-level dataset to study the effect of COVID-19 in people with Multiple Sclerosis
Multiple Sclerosis (MS) is an inflammatory autoimmune disease of the central nervous system, causing increased vulnerability to infections and disability among young adults. Ever since the coronavirus disease 2019 (COVID-19) outbreak, caused by seve…
Database
Open Access
PTB-XL+, a comprehensive electrocardiographic feature dataset
The PTB-XL+ dataset is a comprehensive feature dataset that supplements the PTB-XL ECG dataset. It includes ECG features extracted via two commercial and one open-source algorithm in a harmonized format as well as median beats or, where applicable, …
Database
Credentialed Access
MIMIC-III and eICU-CRD: Feature Representation by FIDDLE Preprocessing
This is a preprocessed dataset derived from patient records in MIMIC-III and eICU, two large-scale electronic health record (EHR) databases. It contains features and labels for 5 prediction tasks involving 3 adverse outcomes (prediction times listed…
Software
Open Access
Waveform Database Software Package (WFDB) for MATLAB and Octave
Physiological waveforms - such as electrocardiograms (ECG), electroencephalograms (EEG), electromyograms (EMG) - are generated during the course of routine care. These signals contain information that can be used to understand underlying conditions …
Challenge
Restricted Access
WiDS (Women in Data Science) Datathon 2020: ICU Mortality Prediction
WiDS (Women in Data Science) Datathon 2020: ICU Mortality Prediction focuses on patient health through data from MIT’s GOSSIS (Global Open Source Severity of Illness Score) initiative. Brought to you by the Global WiDS team, the West Big Data Innova…