Resources
Database Credentialed Access
MIMIC-CXR-JPG - chest radiographs with structured labels
Alistair Johnson, Matthew Lungren, Yifan Peng, Zhiyong Lu, Roger Mark, Seth Berkowitz, Steven Horng
mimic computer vision chest x-ray radiology deep learning
Published: March 12, 2024. Version: 2.1.0
Database Open Access
CheXmask Database: a large-scale dataset of anatomical segmentation masks for chest x-ray images
Nicolas Gaggion, Candelaria Mosquera, Martina Aineseder, Lucas Mansilla, Diego Milone, Enzo Ferrante
chest x-ray segmentation medical image segmentation automatic quality assesment
Published: March 1, 2024. Version: 0.4
Database Restricted Access
OpenOximetry Repository
Nicholas Fong, Michael Lipnick, Philip Bickler, John Feiner, Tyler Law
Published: Feb. 27, 2024. Version: 1.0.0
Database Credentialed Access
EchoNotes Structured Database derived from MIMIC-III (ECHO-NOTE2NUM)
Gloria Hyunjung Kwak, Dana Moukheiber, Mira Moukheiber, Lama Moukheiber, Sulaiman Moukheiber, Neel Butala, Leo Anthony Celi, Christina Chen
Published: Feb. 23, 2024. Version: 1.0.0
Database Credentialed Access
CHIFIR: Cytology and Histopathology Invasive Fungal Infection Reports
Vlada Rozova, Anna Khanina, Jasmine Teng, Joanne Teh, Leon Worth, Monica Slavin, karin thursky, Karin Verspoor
nlp information extraction clinical documentation invasive fungal infections
Published: Feb. 20, 2024. Version: 1.0.2
Database Credentialed Access
MIMIC-IV on FHIR
Alex Bennett, Joshua Wiedekopf, Hannes Ulrich, Philip van Damme, Alistair Johnson
mimic-iv fhir electronic health record
Published: Feb. 20, 2024. Version: 1.0
Database Credentialed Access
CORAL: expert-Curated medical Oncology Reports to Advance Language model inference
Madhumita Sushil, Vanessa Kennedy, Divneet Mandair, Brenda Miao, Travis Zack, Atul Butte
artificial intelligence electronic health records information extraction natural language processing oncology large language models
Published: Feb. 7, 2024. Version: 1.0
Database Open Access
A Multi-Modal Satellite Imagery Dataset for Public Health Analysis in Colombia
Sebastian A Cajas, David Restrepo, Dana Moukheiber, Kuan Ting Kuo, Chenwei Wu, David Santiago Garcia Chicangana, Atika Rahman Paddo, Mira Moukheiber, Lama Moukheiber, Sulaiman Moukheiber, Saptarshi Purkayastha, Diego M Lopez, Po-Chih Kuo, Leo Anthony Celi
multimodality satellite imagery
Published: Jan. 30, 2024. Version: 1.0.0
Database Credentialed Access
RadCoref: Fine-tuning coreference resolution for different styles of clinical narratives
Yuxiang Liao, Hantao Liu, Irena Spasic
radiology natural language processing coreference resolution
Published: Jan. 30, 2024. Version: 1.0.0
Database Credentialed Access
Annotation dataset of social determinants of health from MIMIC-III Clinical Care Database
Marco Guevara, Shan Chen, Spencer Thomas, Danielle Bitterman
natural language processing social determinants of health
Published: Jan. 24, 2024. Version: 1.0.1