Resources


Database Credentialed Access

EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images

Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi

We present EHRXQA, the first multi-modal EHR QA dataset combining structured patient records with aligned chest X-ray images. EHRXQA contains a comprehensive set of QA pairs covering image-related, table-related, and image+table-related questions.

question answering electronic health records evaluation chest x-ray multi-modal question answering ehr question answering semantic parsing benchmark machine learning deep learning visual question answering

Published: July 23, 2024. Version: 1.0.0

Database Restricted Access

EchoNext: A Dataset for Detecting Echocardiogram-Confirmed Structural Heart Disease from ECGs

Pierre Elias, Joshua Finer

EchoNext is a curated dataset of electrocardiograms (ECGs) paired with echocardiogram-confirmed structural heart disease labels, designed to support the development and validation of machine learning models.

heart failure clinical decision support artificial intelligence health equity ecg machine learning deep learning electrocardiogram aortic stenosis cardiovascular screening valvular heart disease digital health ai model deployment left ventricular dysfunction ai in healthcare population health transthoracic echocardiogram structural heart disease

Published: Sept. 16, 2025. Version: 1.1.0

Database Credentialed Access

RadGraph-XL: A Large-Scale Expert-Annotated Dataset for Entity and Relation Extraction from Radiology Reports

Jean-Benoit Delbrouck

RadGraph-XL is a large, expert-annotated dataset of 2,300 radiology reports covering multiple modalities and anatomies. It enables accurate extraction of clinical entities and relations for downstream medical AI tasks.

Published: Sept. 12, 2025. Version: 1.0.0

Database Open Access

MIMIC-IV Clinical Database Demo on FHIR

Alex Bennett, Hannes Ulrich, Joshua Wiedekopf, Piotr Szul, John Grimes, Alistair Johnson

The MIMIC-IV Clinical Database Demo on FHIR is a 100 patient subset of the MIMIC-IV v2.2 and MIMIC-IV-ED v2.2 clinical databases converted into the Fast Healthcare Interoperability Resources (FHIR) format.

fhir electronic health records mimic

Published: Aug. 27, 2025. Version: 2.1.0

Database Restricted Access

Swiss-Mammo: A physician-written, synthetic dataset of German mammography reports

Daniel Reichenpfader, Sandro von Däniken, Harald Marcel Bonel

Swiss-Mammo: A physician-written, synthetic dataset of 28 German mammography reports. The dataset is stratified based on BI-RADS categories and available in German and English.

radiology mammography structured reporting bi-rads

Published: June 24, 2025. Version: 1.0.1

Database Open Access

Hillel Yaffe Glaucoma Dataset (HYGD): A Gold-Standard Annotated Fundus Dataset for Glaucoma Detection

Or Abramovich, Hadas Pizem, Jonathan Fhima, Eran Berkowitz, Ben Gofrit, Jan Van Eijgen, Eytan Blumenthal, Joachim Behar

HYGD is a rigorously annotated fundus image dataset with gold-standard clinical labels designed to improve and benchmark deep learning models for accurate glaucoma detection.

ophthalmology retina dfi gold-standard gon fundus glaucoma

Published: June 3, 2025. Version: 1.0.0

Database Credentialed Access

Medical-CXR-VQA dataset: A Large-Scale LLM-Enhanced Medical Dataset for Visual Question Answering on Chest X-Ray Images

Xinyue Hu, Lin Gu, Kazuma Kobayashi, liangchen liu, Mengliang Zhang, Tatsuya Harada, Ronald Summers, Yingying Zhu

Medical-CXR-VQA provides a large-scale LLM-enhanced dataset for visual question answering in medical chest x-ray images.

Published: Jan. 21, 2025. Version: 1.0.0

Database Credentialed Access

ReXPref-Prior: A MIMIC-CXR Preference Dataset for Reducing Hallucinated Prior Exams in Radiology Report Generation

Oishi Banerjee, Hong-Yu Zhou, Subathra Adithan, Stephen Kwak, Kay Wu, Pranav Rajpurkar

We propose ReXPref-Prior, an adapted version of MIMIC-CXR where GPT-4 has removed references to prior exams from both findings and impression sections of chest X-ray reports.

chest x-rays reinforcement learning hallucination

Published: Aug. 14, 2024. Version: 1.0.0

Database Credentialed Access

RadGraph2: Tracking Findings Over Time in Radiology Reports

Adam Dejl, Sameer Khanna, Patricia Therese Pile, Kibo Yoon, Steven QH Truong, Hanh Duong, Agustina Saenz, Pranav Rajpurkar

RadGraph2 is a dataset of 800 chest radiology reports annotated using a fine-grained entity-relationship schema, which captures key findings as well as mentions of changes that occurred in comparison with the previous radiology studies.

chest x-rays relation extraction disease progression information extraction radiology reports named entity recognition

Published: Aug. 8, 2024. Version: 1.0.0

Database Credentialed Access

EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images

Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi

We present EHRXQA, the first multi-modal EHR QA dataset combining structured patient records with aligned chest X-ray images. EHRXQA contains a comprehensive set of QA pairs covering image-related, table-related, and image+table-related questions.

question answering electronic health records evaluation chest x-ray multi-modal question answering ehr question answering semantic parsing benchmark machine learning deep learning visual question answering

Published: July 23, 2024. Version: 1.0.0