Resources

70 results for "clinical annotation"

Model Credentialed Access

RadVLM model

Nicolas Deperrois, Hidetoshi Matsuo, Samuel Ruiperez-Campillo, et al.

We present RadVLM, a compact (7B) multitask conversational foundation model designed for CXR interpretation. Its development relies on the curation of a large-scale instruction dataset comprising over 1 million image-instruction pairs containing bot…
Published: Oct. 8, 2025. Version: 1.0.0
Database Open Access

PTB-XL, a large publicly available electrocardiography dataset

Patrick Wagner, Nils Strodthoff, Ralf-Dieter Bousseljot, et al.

Electrocardiography (ECG) is a key diagnostic tool to assess the cardiac condition of a patient. Automatic ECG interpretation algorithms as diagnosis support systems promise large reliefs for the medical personnel - only on the basis of the number o…
Published: Nov. 9, 2022. Version: 1.0.3 | Visualize waveforms
Database Credentialed Access

MedDec: Medical Decisions for Discharge Summaries in the MIMIC-III Database

Mohamed Elgaar, Jiali Cheng, Nidhi Vakil, et al.

Medical decisions directly impact individuals’ health and well-being. Extracting decision spans from clinical notes plays a crucial role in understanding medical decision-making processes. The MedDec dataset includes expert-annotated decisions of te…
Published: Oct. 16, 2024. Version: 1.0.0
Database Credentialed Access

Annotated Social Determinants of Health Dataset for Adverse Pregnancy Outcomes

Nidhi Soley, MaKhaila Bentil, Jash Shah, et al.

This project presents an annotated dataset derived from MIMIC-III and MIMIC-IV discharge summaries, focusing on key Social Determinants of Health (SDoH) factors—social support, occupation, and substance use—and their association with adverse pregnan…
Published: Aug. 4, 2025. Version: 1.0.0
Database Credentialed Access

Annotated MIMIC-IV discharge summaries for a study on deidentification of names

Shulammite Lim, Yuxin Xiao, Alistair Johnson, et al.

We introduce a dataset of people’s names and clinical note templates to support research on the demographic bias of de-identification systems. The dataset contains 16 name sets that vary along four demographic dimensions: gender, race, name populari…
Published: July 5, 2023. Version: 1.0
Database Credentialed Access

RadGraph: Extracting Clinical Entities and Relations from Radiology Reports

Saahil Jain, Ashwin Agrawal, Adriel Saporta, et al.

RadGraph is a dataset of entities and relations in full-text radiology reports. We designed a novel information extraction (IE) schema to structure clinical information in a radiology report with four entities and three relations. Our train set cons…
Published: June 3, 2021. Version: 1.0.0
Challenge Credentialed Access

SNOMED CT Entity Linking Challenge

Will Hardman, Mark Banks, Rory Davidson, et al.

This challenge, sponsored by SNOMED International, seeks to advance the development of Entity Linking models that operate on unstructured clinical texts. Participants in the challenge will train entity linking models using a subset of MIMIC-IV-Note …
Published: Feb. 17, 2026. Version: 1.2.1
Database Restricted Access

VinDr-SpineXR: A large annotated medical image dataset for spinal lesions detection and classification from radiographs

Hieu Huy Pham, Hieu Nguyen Trung, Ha Quy Nguyen

Radiographs are used as the most critical imaging tool for identifying spine anomalies in clinical practice [1]. The evaluation of spinal bone lesions, however, is a challenging task for radiologists. To the best of our knowledge, no existing studie…
Published: Aug. 24, 2021. Version: 1.0.0
Database Credentialed Access

Immunosuppressive Condition and Medication Annotations for Admission Notes in the MIMIC-III Database

Vijeeth Guggilla, Melissa Bak, Mengjia Kang, et al.

Immunosuppression due to underlying conditions or immunosuppressive medication use increases the risk of morbidity and mortality in the context of infectious disease. Identifying patients with immunosuppression is important for better studying and u…
Published: Aug. 4, 2025. Version: 1.0.0
Database Open Access

Hillel Yaffe Glaucoma Dataset (HYGD): A Gold-Standard Annotated Fundus Dataset for Glaucoma Detection

Or Abramovich, Hadas Pizem, Jonathan Fhima, et al.

Glaucomatous optic neuropathy (GON) is a leading cause of irreversible blindness worldwide, affecting an estimated 64.3 million people globally with projections reaching 111.8 million by 2040. Approximately 50% of cases remain undiagnosed until adva…
Published: March 16, 2026. Version: 1.1.0