Resources


Database Credentialed Access

AIPatient KG: MIMIC-III and CORAL Electronic Health Records based Patient Knowledge Graph

Lizhou Fan, Huizi Yu

This project integrates MIMIC-III and CORAL electronic health records into knowledge graphs to improve medical analysis and enhance decision-making capabilities. Resources include two knowledge graph snapshots and two question-and-answering datasets.

Published: April 15, 2025. Version: 1.0.0

Database Open Access

ReXErr-v1: Clinically Meaningful Chest X-Ray Report Errors Derived from MIMIC-CXR

Vishwanatha Rao, Serena Zhang, Julian Acosta, et al.

Chest X-Ray reports containing synthetic errors based upon the MIMIC-CXR database. Errors were injected using LLMs and sampled across common human and AI model errors.

Published: March 19, 2025. Version: 1.0.0

Database Credentialed Access

MIMICEL: MIMIC-IV Event Log for Emergency Department

Jia Wei, Zhipeng He, Chun Ouyang, et al.

MIMIC-IV Event Log for Emergency Department

Published: June 16, 2023. Version: 2.1.0

Database Credentialed Access

CXR-PRO: MIMIC-CXR with Prior References Omitted

Vignav Ramesh, Nathan Chi, Pranav Rajpurkar

CXR-PRO is an adaptation of the MIMIC-CXR dataset (consisting of chest radiographs and their associated free-text radiology reports) with references to non-existent priors removed.

generation free-text radiology reports references to priors retrieval large language models

Published: Nov. 23, 2022. Version: 1.0.0

Software Credentialed Access

Code for generating the HAIM multimodal dataset of MIMIC-IV clinical data and x-rays

Luis R Soenksen, Yu Ma, Cynthia Zeng, et al.

Code for generating the HAIM multimodal dataset of MIMIC-IV clinical data and x-rays

database code multimodality

Published: Aug. 23, 2022. Version: 1.0.1

Database Open Access

MIMIC-IV demo data in the OMOP Common Data Model

Michael Kallfelz, Anna Tsvetkova, Tom Pollard, et al.

Preliminary work to transform a MIMIC-IV demo dataset to the OMOP Common Data Model

omop common data model

Published: June 21, 2021. Version: 0.9

Database Open Access

MIMIC-III Waveform Database Matched Subset

Benjamin Moody, George Moody, Mauricio Villarroel, et al.

Physiological signals (including continuous ECG, PPG, ABP, and other signals) that are associated with patients in the MIMIC-III Clinical Database.

Published: April 7, 2020. Version: 1.0

Visualize waveforms

Database Credentialed Access

MIMIC-IV-ECHO-Ext-LVVOLUMES-A4C-ROI: Annotated Subset of Apical Four-Chamber Echocardiography for PoCUS-Style LV Volume and Function Analysis

Kamlin Ekambaram, Anurag Arnab, Philip Herbst, et al.

A curated subset of MIMIC-IV-ECHO providing apical four-chamber cine loops with manual ROI masks, volumetric labels, and ready-to-use MP4/NPZ derivatives for robust LV volume and ejection fraction research.

ultrasound deep learning echocardiography medical imaging dicom lvesv roi segmentation cardiac video analysis left ventricular volume mimic-iv-echo apical four-chamber quantitative cardiology biplane simpson transformer models lvef ejection fraction a4c pocus lvedv domain adaptation

Published: Feb. 26, 2026. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-22MCTS: A 22 Millions-Event Temporal Clinical Time-Series Dataset with Relative Timestamp

Jing Wang, Xing Niu, Tong Zhang, et al.

It is a time series clinical events dataset with concrete temporal information. The dataset consists of 22,588,586 clinical events and related timestamps from 267,284 discharge summaries of the MIMIC-IV-Note.

mimic clinical event annotation time series temporal annotation

Published: Sept. 29, 2025. Version: 1.0.0

Database Credentialed Access

MedDec: Medical Decisions for Discharge Summaries in the MIMIC-III Database

Mohamed Elgaar, Jiali Cheng, Nidhi Vakil, et al.

Annotations of ten types of medical decisions from discharge summaries in the MIMIC-III database.

natural language processing medical decisions span classification discharge summary mimic

Published: Oct. 16, 2024. Version: 1.0.0