Resources

70 results for "clinical annotation"

Database Credentialed Access

RadQA: A Question Answering Dataset to Improve Comprehension of Radiology Reports

Sarvesh Soni, Kirk Roberts

We present a radiology question answering dataset, RadQA, with 3074 questions posed against radiology reports and annotated with their corresponding answer spans (resulting in a total of 6148 question-answer evidence pairs) by physicians. The questi…
Published: Dec. 9, 2022. Version: 1.0.0
Database Credentialed Access

PIFIR: PET-CT Invasive Fungal Infection Reports

Vlada Rozova, Anna Khanina, Jeremy Ong, et al.

Surveillance of invasive fungal infection (IFI) in clinical settings is a laborious process requiring a detailed review of patient medical history. One of the key sources of clinical information is imaging reports: radiologist-produced free-text rep…
Published: Feb. 27, 2025. Version: 1.0.0
Database Credentialed Access

CHIFIR: Cytology and Histopathology Invasive Fungal Infection Reports

Vlada Rozova, Anna Khanina, Jasmine Teng, et al.

Surveillance of invasive fungal infection (IFI) in clinical settings is a laborious process requiring a detailed review of patient medical history. One of the key sources of clinical information is cytology and histopathology reports: pathologist-pr…
Published: Feb. 20, 2024. Version: 1.0.2
Database Open Access

MIT-BIH Arrhythmia Database

George Moody, Roger Mark

The MIT-BIH Arrhythmia Database contains 48 approximately half-hour, two-channel ambulatory electrocardiogram (ECG) recordings from 47 subjects. The recordings were collected at Boston's Beth Israel Hospital between 1975 and 1979 and include both ra…
Published: Feb. 24, 2005. Version: 1.0.0 | Visualize waveforms
Database Contributor Review

CARMEN-I: A resource of anonymized electronic health records in Spanish and Catalan for training and testing NLP tools

Eulalia Farre Maduell, Salvador Lima-Lopez, Santiago Andres Frid, et al.

The CARMEN-I corpus comprises 2,000 clinical records, encompassing discharge letters, referrals, and radiology reports from Hospital Clínic of Barcelona between March 2020 and March 2022. These reports, primarily in Spanish with some Catalan section…
Published: April 20, 2024. Version: 1.0.1
Database Restricted Access

MIMIC-Eye: Integrating MIMIC Datasets with REFLACX and Eye Gaze for Multimodal Deep Learning Applications

Chihcheng Hsieh, Chun Ouyang, Jacinto C Nascimento, et al.

Deep learning technologies have been widely adopted in medical imaging due to their ability to extract features from images and make accurate diagnoses automatically. Medical imaging technologies are particularly useful because they can be trained t…
Published: March 23, 2023. Version: 1.0.0
Database Credentialed Access

RadGraph2: Tracking Findings Over Time in Radiology Reports

Adam Dejl, Sameer Khanna, Patricia Therese Pile, et al.

RadGraph2 is a dataset of 800 chest radiology reports annotated using a fine-grained entity-relationship schema, which is an expanded version of the previously introduced RadGraph dataset. In contrast with the previous approaches and the original Ra…
Published: Aug. 8, 2024. Version: 1.0.0
Model Credentialed Access

EntityBERT: BERT-based Models Pretrained on MIMIC-III with or without Entity-centric Masking Strategy for the Clinical Domain

Chen Lin, Steven Bethard, Guergana Savova, et al.

Transformer-based neural language models have led to breakthroughs for a variety of natural language processing (NLP) tasks. However, most models are pretrained on general domain data. We propose a methodology to produce a model focused on the clini…
Published: March 17, 2022. Version: 1.0.1
Database Credentialed Access

RadNLI: A natural language inference dataset for the radiology domain

Yasuhide Miura, Yuhao Zhang, Emily Tsai, et al.

The problem of natural language inference (NLI) determines whether a natural language hypothesis can be justifiably inferred from a natural language premise. NLI has attracted researchers to benchmark it in a number of settings including medical one…
Published: June 29, 2021. Version: 1.0.0
Database Credentialed Access

National Institutes of Health Stroke Scale (NIHSS) Annotations for the MIMIC-III Database

Jiayang Wang, Xiaoshuo Huang, Lin Yang, et al.

The National Institutes of Health Stroke Scale (NIHSS) is a 15-item neurologic examination stroke scale. It quantifies the physical manifestations of neurological deficits and provides crucial support for clinical decision making and early-stage eme…
Published: Jan. 25, 2021. Version: 1.0.0