Resources


Database Credentialed Access

MIMIC-IV-Ext Cardiac Disease

Jiawei Cao, Sendong Zhao

The subset of the MIMIC-IV dataset includes the examination results and diagnostic information of 4,761 cardiac disease patients. The examination results for each patient are listed separately as evidence for the final diagnosis.

Published: May 6, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-CEKG: A Process-Oriented Dataset Derived from MIMIC-IV for Enhanced Clinical Insights

Milad Naeimaei Aali, Felix Mannhardt, Pieter Jelle Toussaint

The MIMIC-IV-Ext-CEKG dataset is crafted for object-centric process mining in healthcare, specifically to create clinical event knowledge graphs for patients with multimorbidity, as well as for data mining and machine learning tasks.

mimic process mining multi entity process mining object centric event log clinical event knowledge graph

Published: April 8, 2025. Version: 1.0.0

Database Open Access

ReXErr-v1: Clinically Meaningful Chest X-Ray Report Errors Derived from MIMIC-CXR

Vishwanatha Rao, Serena Zhang, Julian Acosta, et al.

Chest X-Ray reports containing synthetic errors based upon the MIMIC-CXR database. Errors were injected using LLMs and sampled across common human and AI model errors.

Published: March 19, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext Triage Instruction Corpus

Qingyang Shen, Quan Guo

MIMIC-IV-Ext Triage Instruction Corpus includes 9,629 ED triage cases organized by the five-level ESI, enabling LLMs to improve triage accuracy. It provides CSV data, generation prompts, expert validation samples, and SQL QC scripts.

nlp clinical decision support machine learning large language models emergency severity index emergency triage

Published: March 4, 2025. Version: 1.0.0

Database Restricted Access

Dataset for Segmentation and Classification of Cardiac Implantable Electronic Devices in Chest X-Rays

Keno Bressem, Felix Busch, Andrei Zhukov, et al.

This dataset comprises 11,094 converted DICOM and smartphone images of Cardiac Implantable Electronic Devices (CIEDs), collected from 897 patients. It aims to facilitate the development of algorithms for CIED detection and classification.

chest x-ray radiology cardiac implantable electronic devices medical imaging

Published: March 4, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-BHC: Labeled Clinical Notes Dataset for Hospital Course Summarization

Asad Aali, Dave Van Veen, Yamin Arefeen, et al.

This dataset presents a collection of preprocessed and labeled clinical notes derived from "MIMIC-IV-Note", and aims to facilitate the development of ML models focused on summarizing brief hospital courses (BHC) from clinical notes.

natural language processing clinical notes machine learning brief hospital course text summarization

Published: Feb. 3, 2025. Version: 1.2.0

Database Open Access

Synthetic Mention Corpora for Disease Entity Recognition and Normalization

Kuleen Sasse, John David Osborne

We present the Synthetic Mention Corpora for Disease Entity Recognition and Normalization, containing 128000 disease mentions from the UMLS disorder group, generated by an LLM. This corpus aims to improve these tasks in biomedical and clinical texts.

nlp machine learning named entity recognition data augmentation entity normalization

Published: Feb. 3, 2025. Version: 1.0.0

Database Open Access

CheXmask Database: a large-scale dataset of anatomical segmentation masks for chest x-ray images

Nicolas Gaggion, Candelaria Mosquera, Martina Aineseder, et al.

CheXmask Database is a 657,566 uniformly annotated chest radiographs with segmentation masks. Images were segmented using HybridGNet, with automatic quality control indicated by RCA scores.

automatic quality assesment chest x-ray segmentation medical image segmentation

Published: Jan. 22, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-IV on FHIR

Alex Bennett, Joshua Wiedekopf, Hannes Ulrich, et al.

MIMIC-IV and MIMIC-IV-ED data mapped into FHIR resources.

mimic-iv fhir electronic health record us core fast healthcare interoperability resources mimic

Published: Nov. 12, 2024. Version: 2.1

Database Contributor Review

COVID Data for Shared Learning (CDSL): A comprehensive, multimodal COVID-19 dataset from HM Hospitales

Álvaro Ritoré, Andreea M Oprescu, Alberto Estirado Bronchalo, et al.

COVID Data for Shared Learning (CDSL) is a multimodal database comprising de-identified structured health data and radiological images from 4,479 patients with COVID-19, as a comprehensive toolkit for developing predictive models.

covid-19 multimodal database radiological images open data healthcare data machine learning and ai

Published: Oct. 25, 2024. Version: 1.0.0