Resources

6 results for "knowledge graph"

Database Credentialed Access

AIPatient KG: MIMIC-III and CORAL Electronic Health Records based Patient Knowledge Graph

Lizhou Fan, Huizi Yu

This study integrates the MIMIC-III and CORAL electronic health records into knowledge graphs to enhance their utility for advanced medical analysis and decision-making. MIMIC-III contains comprehensive data from over 40,000 patients, while CORAL fo…
Published: April 15, 2025. Version: 1.0.0
Database Credentialed Access

MIMIC-IV-Ext-CEKG: A Process-Oriented Dataset Derived from MIMIC-IV for Enhanced Clinical Insights

Milad Naeimaei Aali, Felix Mannhardt, Pieter Jelle Toussaint

Maintaining a healthy population is essential for improving quality of life and overall societal well-being. One approach to achieving a healthy population is by improving patients' care pathways. This is particularly vital for patients with multipl…
process mining multi entity process mining object centric event log clinical event knowledge graph mimic
Published: April 8, 2025. Version: 1.0.0
Database Open Access

Synthetic Mention Corpora for Disease Entity Recognition and Normalization

Kuleen Sasse, John David Osborne

Named Entity Recognition (NER) and Entity Normalization (EN) are fundamental tasks in information extraction, particularly in the biomedical and clinical domains. NER identifies textual mentions of entities, while EN maps these mentions to unique id…
nlp entity normalization named entity recognition data augmentation machine learning
Published: Feb. 3, 2025. Version: 1.0.0
Database Credentialed Access

RadGraph2: Tracking Findings Over Time in Radiology Reports

Adam Dejl, Sameer Khanna, Patricia Therese Pile, et al.

RadGraph2 is a dataset of 800 chest radiology reports annotated using a fine-grained entity-relationship schema, which is an expanded version of the previously introduced RadGraph dataset. In contrast with the previous approaches and the original Ra…
relation extraction chest x-rays disease progression information extraction radiology reports named entity recognition
Published: Aug. 8, 2024. Version: 1.0.0
Database Credentialed Access

MIMIC-Ext-CXR-QBA: A Structured, Tagged, and Localized Visual Question Answering Dataset with Question-Box-Answer Triplets and Scene Graphs for Chest X-ray Images

Philip Müller, Friederike Jungmann, Georgios Kaissis, et al.

Visual Question Answering (VQA) enables flexible and context-dependent analysis of medical images, such as chest X-rays (CXRs), by allowing users to pose specific questions and receive nuanced answers. However, existing CXR VQA datasets are typicall…
chest x-rays vqa localization scene graphs
Published: Aug. 25, 2026. Version: 1.0.1
Database Credentialed Access

Chest ImaGenome Dataset

Joy Wu, Nkechinyere Agu, Ismini Lourentzou, et al.

In recent years, with the release of multiple large datasets, automatic interpretation of chest X-ray (CXR) images with deep learning models have become feasible for specific abnormalities or for generating preliminary reports. However, despite repo…
scene graph visual dialogue object detection semantic reasoning bounding box knowledge graph explainability reasoning relation extraction chest disease progression cxr chest x-ray radiology multimodal visual question answering deep learning machine learning
Published: July 13, 2021. Version: 1.0.0