Resources
30 results for "open-source"
Database
Credentialed Access
GOSSIS-1-eICU, the eICU-CRD subset of the Global Open Source Severity of Illness Score (GOSSIS-1) dataset
GOSSIS-1 is a modern, free, open-source in-hospital mortality prediction algorithm for critical care patients, achieving excellent discrimination and calibration across three countries (Australia, New Zealand and the USA). GOSSIS-1 was developed on …
Software
Open Access
PhysioTag: An Open-Source Platform for Collaborative Annotation of Physiological Waveforms
To develop robust algorithms for automated diagnosis of medical conditions such as cardiac arrhythmias, researchers require large collections of data with human expert annotations. Currently, there is a lack of accessible, open-source platforms for …
Software
Open Access
R-DECO: An open-source Matlab based graphical user interface for the detection and correction of R-peaks
Many of the existing ECG toolboxes focus on the derivation of heart rate variability features from RR-intervals. By doing so, they assume correct detection of the QRS-complexes. However, it is highly likely that not all detections are correct. There…
Model
Credentialed Access
Me-LLaMA: Foundation Large Language Models for Medical Applications
Recent advancements in large language models (LLMs) such as ChatGPT and LLaMA have hinted at their potential to revolutionize medical applications, yet their application in clinical settings often reveals limitations due to a lack of specialized tra…
Database
Credentialed Access
PatientSim: A Persona-Driven Simulator for Realistic Doctor-Patient Interactions
Doctor-patient consultations require multi-turn, context-aware communication tailored to diverse patient personas. Training or evaluating doctor LLMs in such settings requires realistic patient interaction systems. However, existing simulators often…
Model
Credentialed Access
Medical AI Research Foundations: A repository of medical foundation models
Medical AI Research Foundations is a repository of open-source medical foundation models. With this collection of non-diagnostic models, APIs, and resources like code and data, researchers and developers can accelerate their medical AI research. Thi…
Database
Open Access
Continuous high-density physiological signals from a surgical intensive care unit at Hospital Clínic de Barcelona
Bedside monitors in intensive care units continuously generate high-resolution physiological signals that are rarely preserved systematically for research. This resource makes available to the community a set of multiparametric waveform recordings p…
Database
Credentialed Access
MIMIC-IV-Ext-CLIF: MIMIC-IV in the Common Longitudinal ICU data Format (CLIF)
MIMIC-IV-Ext-CLIF is a derived dataset of MIMIC-IV v3.1, transformed into the Common Longitudinal ICU data Format (CLIF). CLIF is an open-source critical care data model developed by a consortium of more than 10 US academic medical centers to standa…
Software
Open Access
Vital File Web Viewer: A Browser-Based Tool for Viewing High-Resolution Vital Signs Data
Vital File Web Viewer is an open-source, browser-based tool for visualizing high-resolution vital signs data stored in the .vital format, commonly used during surgery or intensive care monitoring. The viewer enables seamless access to time-series wa…
Database
Restricted Access
MIMIC-IV-Ext-Apixaban-Trial-Criteria-Questions
Large-language models (LLMs) show promise for extracting information from clinical notes. Deploying these models at scale can be challenging due to high computational costs, regulatory constraints, and privacy concerns. To address these challenges, …