Resources

30 results for "open-source"

Database Credentialed Access

GOSSIS-1-eICU, the eICU-CRD subset of the Global Open Source Severity of Illness Score (GOSSIS-1) dataset

Jesse Raffa, Alistair Johnson, Tom Pollard, et al.

GOSSIS-1 is a modern, free, open-source in-hospital mortality prediction algorithm for critical care patients, achieving excellent discrimination and calibration across three countries (Australia, New Zealand and the USA). GOSSIS-1 was developed on …
Published: July 20, 2022. Version: 1.0.0
Software Open Access

PhysioTag: An Open-Source Platform for Collaborative Annotation of Physiological Waveforms

Lucas McCullum, Benjamin Moody, Hasan Saeed, et al.

To develop robust algorithms for automated diagnosis of medical conditions such as cardiac arrhythmias, researchers require large collections of data with human expert annotations. Currently, there is a lack of accessible, open-source platforms for …
Published: April 25, 2023. Version: 1.0.0
Software Open Access

R-DECO: An open-source Matlab based graphical user interface for the detection and correction of R-peaks

Jonathan Moeyersons, Matthew Amoni, Sabine Van Huffel, et al.

Many of the existing ECG toolboxes focus on the derivation of heart rate variability features from RR-intervals. By doing so, they assume correct detection of the QRS-complexes. However, it is highly likely that not all detections are correct. There…
Published: Sept. 8, 2020. Version: 1.0.0
Model Credentialed Access

Me-LLaMA: Foundation Large Language Models for Medical Applications

Qianqian Xie, Qingyu Chen, Aokun Chen, et al.

Recent advancements in large language models (LLMs) such as ChatGPT and LLaMA have hinted at their potential to revolutionize medical applications, yet their application in clinical settings often reveals limitations due to a lack of specialized tra…
Published: June 5, 2024. Version: 1.0.0
Database Credentialed Access

PatientSim: A Persona-Driven Simulator for Realistic Doctor-Patient Interactions

Daeun Kyung, Hyunseung Chung, Seongsu Bae, et al.

Doctor-patient consultations require multi-turn, context-aware communication tailored to diverse patient personas. Training or evaluating doctor LLMs in such settings requires realistic patient interaction systems. However, existing simulators often…
Published: Oct. 18, 2025. Version: 1.0.0
Model Credentialed Access

Medical AI Research Foundations: A repository of medical foundation models

Shekoofeh Azizi, Jan Freyberg, Laura Culp, et al.

Medical AI Research Foundations is a repository of open-source medical foundation models. With this collection of non-diagnostic models, APIs, and resources like code and data, researchers and developers can accelerate their medical AI research. Thi…
Published: April 25, 2023. Version: 1.0.0
Database Open Access

Continuous high-density physiological signals from a surgical intensive care unit at Hospital Clínic de Barcelona

Ramses Marrero Garcia, Rosalia Cayuela Perez, Guido Muñoz Rojas, et al.

Bedside monitors in intensive care units continuously generate high-resolution physiological signals that are rarely preserved systematically for research. This resource makes available to the community a set of multiparametric waveform recordings p…
Published: Oct. 19, 2026. Version: 1.0.0 | Visualize waveforms
Database Credentialed Access

MIMIC-IV-Ext-CLIF: MIMIC-IV in the Common Longitudinal ICU data Format (CLIF)

Zewei Liao, Shan Guleria, Kevin Smith, et al.

MIMIC-IV-Ext-CLIF is a derived dataset of MIMIC-IV v3.1, transformed into the Common Longitudinal ICU data Format (CLIF). CLIF is an open-source critical care data model developed by a consortium of more than 10 US academic medical centers to standa…
Published: March 23, 2026. Version: 1.1.0
Software Open Access

Vital File Web Viewer: A Browser-Based Tool for Viewing High-Resolution Vital Signs Data

Eunsun Rachel Lee, Hyung-Chul Lee

Vital File Web Viewer is an open-source, browser-based tool for visualizing high-resolution vital signs data stored in the .vital format, commonly used during surgery or intensive care monitoring. The viewer enables seamless access to time-series wa…
Published: Sept. 1, 2025. Version: 1.0.0
Database Restricted Access

MIMIC-IV-Ext-Apixaban-Trial-Criteria-Questions

Elizabeth Woo, Michael Craig Burkhart, Emily Alsentzer, et al.

Large-language models (LLMs) show promise for extracting information from clinical notes. Deploying these models at scale can be challenging due to high computational costs, regulatory constraints, and privacy concerns. To address these challenges, …
Published: April 30, 2025. Version: 1.0.0