Resources


Model Credentialed Access

RadVLM model

Nicolas Deperrois, Hidetoshi Matsuo, Samuel Ruiperez-Campillo, Moritz Vandenhirtz, Sonia Laguna, Alain Ryser, Koji Fujimoto, Mizuho Nishio, Thomas Sutter, Julia Vogt, Jonas Kluckert, Thomas Frauenfelder, Christian Bluethgen, Farhad Nooralahzadeh, Michael Krauthammer

RadVLM is a 7B-parameter vision-language model fine-tuned on public chest-X-ray data that drafts reports, lists abnormalities, grounds findings, and chats about a CXR through a single image-to-text interface.

Published: Oct. 8, 2025. Version: 1.0.0

Database Restricted Access

Organ Retrieval and Collection of Health Information for Donation (ORCHID)

Hammaad Adam, Vinith Suriyakumar, Tom Pollard, Benjamin Moody, Jennifer Erickson, Greg Segal, Brad Adams, Diane Brockmeier, Kevin Lee, Ginny McBride, Kelly Ranum, Matthew Wadsworth, Janice Whaley, Ashia Wilson, Marzyeh Ghassemi

Multi-center dataset on organ procurement in the United States

organ procurement organizations organ transplantation

Published: Sept. 29, 2025. Version: 2.1.1

Database Credentialed Access

Multimodal Clinical Monitoring in the Emergency Department (MC-MED)

Aman Kansal, Emma Chen, Tom Jin, Pranav Rajpurkar, David Kim

A multimodal dataset of deidentified clinical and physiological data from emergency department visits, supporting research on patient outcomes, care processes, and the effects of continuous monitoring during and after the COVID-19 pandemic.

Published: Sept. 25, 2025. Version: 1.0.1

Challenge Credentialed Access

SNOMED CT Entity Linking Challenge

Will Hardman, Mark Banks, Rory Davidson, Donna Truran, Nindya Widita Ayuningtyas, Hoa Ngo, Alistair Johnson, Tom Pollard

272 discharge notes from the MIMIC-IV-Note dataset annotated with SNOMED CT concepts.

snomed entity linking clinical annotation

Published: July 22, 2025. Version: 1.1.0

Database Credentialed Access

FDTooth: Intraoral Photographs and Cone-Beam Computed Tomography Images for Fenestration and Dehiscence Detection

Yanqi Yang, Xiaomeng LI, Keyuan Liu, Marawan Elbatel

FDTooth is a dataset containing intraoral photographs and cone-beam computed tomography (CBCT) images with annotations for automated detection of fenestration and dehiscence in anterior teeth.

Published: May 5, 2025. Version: 1.0.0

Database Credentialed Access

MeDiSumQA: Patient-Oriented Question-Answer Generation from Discharge Letters

Amin Dada, Osman Alperen Koras, Marie Bauer, Amanda Butler, Kaleb Smith, Jens Kleesiek, Julian Friedrich

MeDiSumQA is a dataset of patient-oriented QA pairs from MIMIC-IV discharge summaries, designed to evaluate LLMs in generating safe, patient-friendly medical responses for clinical QA and healthcare communication.

Published: May 5, 2025. Version: 1.0.0

Database Open Access

Minute level step counts and physical activity data from the National Health and Nutrition Examination Survey (NHANES) 2011-2014

Lily Koffman, John Muschelli

Minute level step counts obtained from five step counting algorithms for raw accelerometry data, and minute level Activity Counts, MIMS, wear predictions, and wear flags for all participants who wore accelerometers in NHANES 2011-2014.

accelerometry physical activity steps nhanes

Published: May 5, 2025. Version: 1.0.1

Database Credentialed Access

Medical Expert Annotations of Unsupported Facts in Doctor-Written and LLM-Generated Patient Summaries

Stefan Hegselmann, Shannon Shen, Florian Gierse, Monica Agrawal, David Sontag, Xiaoyi Jiang

Annotations for unsupported facts in 100 original MIMIC patient summaries (discharge instructions) and hallucinations in 100 Large Language Model (LLM) generated patient summaries labeled by two medical experts.

Published: April 30, 2025. Version: 1.0.1

Challenge Credentialed Access

CXR-LT: Multi-Label Long-Tailed Classification on Chest X-Rays

Gregory Holste, Mingquan Lin, Song Wang, Yiliang Zhou, Yishu Wei, Hao Chen, Atlas Wang, Yifan Peng

CXR-LT 2024 was a challenge for long-tailed, multi-label, and zero-shot thorax disease classification on chest X-rays, held at MICCAI 2024. This page contains long-tailed labels for 45 diseases from the CXR-LT 2024 and 2023 challenges.

disease classification artificial intelligence chest x-ray deep learning computer-aided diagnosis long-tailed learning cardiopulmonary disease zero-shot learning

Published: March 19, 2025. Version: 2.0.0

Database Open Access

Synthetic Mention Corpora for Disease Entity Recognition and Normalization

Kuleen Sasse, John David Osborne

We present the Synthetic Mention Corpora for Disease Entity Recognition and Normalization, containing 128000 disease mentions from the UMLS disorder group, generated by an LLM. This corpus aims to improve these tasks in biomedical and clinical texts.

nlp machine learning named entity recognition data augmentation entity normalization

Published: Feb. 3, 2025. Version: 1.0.0