Resources
29 results for "clinical documentation"
Database
Restricted Access
CONCERN Early Warning System Trial
This dataset contains de-identified encounter level data from a 1-year, multisite, pragmatic, cluster-randomized controlled trial evaluating the CONCERN (COmmunicating Narrative Concerns Entered by RNs) early warning system, a machine learning-based…
Database
Contributor Review
ER-REASON: A Benchmark Dataset for LLM-Based Clinical Reasoning in the Emergency Room
The ER-Reason dataset is a benchmark designed to evaluate LLM-based clinical reasoning and decision-making in the emergency room (ER), a high-stakes setting where clinicians make rapid, consequential decisions across diverse patient presentations an…
Database
Contributor Review
CARMEN-I: A resource of anonymized electronic health records in Spanish and Catalan for training and testing NLP tools
The CARMEN-I corpus comprises 2,000 clinical records, encompassing discharge letters, referrals, and radiology reports from Hospital Clínic of Barcelona between March 2020 and March 2022. These reports, primarily in Spanish with some Catalan section…
Model
Credentialed Access
What's in a Note? Unpacking Predictive Value in Clinical Note Representations
Unlocking the full potential of clinical notes within electronic health records presents a challenge for large scale, computational analyses. Many studies that incorporate information from clinical notes do so with simple word-matching approaches an…
Database
Credentialed Access
MIMIC-IV-Ext MIMIC Note Extract: A Large-Scale Structured Dataset Extracted from MIMIC-IV-Note Discharge Summaries
MIMIC is one of the most widely used public hospital datasets for machine learning on electronic health records [3], but its structured tables answer many clinical questions only through coded surrogates, or not at all. For example, a patient's past…
Database
Open Access
Continuous high-density physiological signals from a surgical intensive care unit at Hospital Clínic de Barcelona
Bedside monitors in intensive care units continuously generate high-resolution physiological signals that are rarely preserved systematically for research. This resource makes available to the community a set of multiparametric waveform recordings p…
Challenge
Credentialed Access
ShAReCLEF eHealth 2013: Natural Language Processing and Information Retrieval for Clinical Care
This is the pilot year of the ShARe/CLEF eHealth Evaluation Lab, a shared task focused on natural language processing (NLP) and information retrieval (IR) for clinical care. The task is co-organized by the Shared Annotated Resources (ShARe) project …
Database
Credentialed Access
MIMIC-IV-Ext-CLIF: MIMIC-IV in the Common Longitudinal ICU data Format (CLIF)
MIMIC-IV-Ext-CLIF is a derived dataset of MIMIC-IV v3.1, transformed into the Common Longitudinal ICU data Format (CLIF). CLIF is an open-source critical care data model developed by a consortium of more than 10 US academic medical centers to standa…
Database
Credentialed Access
Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization
Applying methods in natural language processing on electronic health records (EHR) data is a growing field. Existing corpus and annotation focus on modelling textual features and relation prediction [1] . However, there is a paucity of annotated cor…
Database
Credentialed Access
RadCoref: Fine-tuning coreference resolution for different styles of clinical narratives
RadCoref is a small subset of MIMIC-CXR with manually annotated coreference mentions and clusters. The dataset is annotated by a panel of three cross-disciplinary experts with experience in clinical data processing following the i2b2 annotation sche…