Resources


Challenge Credentialed Access

Analysis of Clinical Text: Task 14 of SemEval 2015

Guergana Savova

This is the dataset for SemEval 2014 and 2015, Analysis of Clinical Text

semeval nlp

Published: Dec. 28, 2014. Version: 2.0

Database Restricted Access

MIMIC-III-Ext-Synthetic-Clinical-Trial-Questions

Elizabeth Woo, Michael Craig Burkhart, Emily Alsentzer, Brett Beaulieu-Jones

In our recent study, we used Llama-3.1-70B-Instruct to generate synthetic training examples resembling clinical trial eligibility criteria. We manually reviewed 1000 of these examples and release them here.

large language models synthetic data distillation clinical trial eligibility

Published: April 22, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-CEKG: A Process-Oriented Dataset Derived from MIMIC-IV for Enhanced Clinical Insights

Milad Naeimaei Aali, Felix Mannhardt, Pieter Jelle Toussaint

The MIMIC-IV-Ext-CEKG dataset is crafted for object-centric process mining in healthcare, specifically to create clinical event knowledge graphs for patients with multimorbidity, as well as for data mining and machine learning tasks.

mimic process mining multi entity process mining object centric event log clinical event knowledge graph

Published: April 8, 2025. Version: 1.0.0

Database Restricted Access

MIMIC-III-Ext-Synthetic-Clinical-Trial-Questions

Elizabeth Woo, Michael Craig Burkhart, Emily Alsentzer, Brett Beaulieu-Jones

In our recent study, we used Llama-3.1-70B-Instruct to generate synthetic training examples resembling clinical trial eligibility criteria. We manually reviewed 1000 of these examples and release them here.

large language models synthetic data distillation clinical trial eligibility

Published: April 22, 2025. Version: 1.0.0

Database Restricted Access

Electrocardiogram-Capable Smartwatches: Assessing Their Clinical Accuracy and Application

Joaquin Recas, Mauro Buelga Suárez, Sergio González-Cabeza, Mario Sanz-Guerrero, Marian Diaz-Vicente, Alfonso Rebolleda, Luis Piñuel Moreno, Gonzalo Luis Alonso Salinas

This database allows the study of the feasibility of using ECG-capable smartwatches as diagnostic tools, focusing on their compliance with clinical standards and their ability to measure critical ECG parameters beyond AF detection.

ischemia fitbit sense ambulatory samsung galaxy watch st-segment apple watch withings scanwatch smartwatch

Published: April 9, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-CEKG: A Process-Oriented Dataset Derived from MIMIC-IV for Enhanced Clinical Insights

Milad Naeimaei Aali, Felix Mannhardt, Pieter Jelle Toussaint

The MIMIC-IV-Ext-CEKG dataset is crafted for object-centric process mining in healthcare, specifically to create clinical event knowledge graphs for patients with multimorbidity, as well as for data mining and machine learning tasks.

mimic process mining multi entity process mining object centric event log clinical event knowledge graph

Published: April 8, 2025. Version: 1.0.0

Database Credentialed Access

SCRIPT X2B8 Dataset: per-day clinical features to model successful next-day extubation

Sam Fenske, Alec Peltekian, Mengjia Kang, Nikolay Markov, Anna Pawlowski, Luke Rasmussen, Thomas Stoeger, Benjamin Singer, GR Scott Budinger, Richard Wunderink, Alexander Misharin, Ankit Agrawal, Catherine A Gao

This dataset contains electronic health record (EHR) data from ICU patients receiving mechanical ventilation, aggregated on a daily basis, along with annotations of intubation, extubation, tracheostomy days, and cases of failed extubation. Data can b

Published: Jan. 28, 2025. Version: 1.0.0

Database Credentialed Access

Annotation dataset of social determinants of health from MIMIC-III Clinical Care Database

Marco Guevara, Shan Chen, Spencer Thomas, Danielle Bitterman

Annotation dataset of social determinants of health from MIMC-III Clinical Care Database notes.

natural language processing social determinants of health

Published: Jan. 24, 2024. Version: 1.0.1

Database Credentialed Access

Learning to Ask Like a Physician: a Discharge Summary Clinical Questions (DiSCQ) Dataset

Eric Lehman

Dataset of questions asked by medical experts about patients. Medical experts will read a discharge summary line-by-line and (1) ask any question that they may have and (2) record what in the text "triggered" them to ask their question.

question generation question answering machine learning

Published: July 28, 2022. Version: 1.0

Database Credentialed Access

MedNLI - A Natural Language Inference Dataset For The Clinical Domain

Chaitanya Shivade

This is a resource for training machine learning models for language inference in the medical domain.

natural language inference recognizing textual entailment

Published: Oct. 1, 2019. Version: 1.0.0