Resources


Database Credentialed Access

Critical care database comprising patients with infection at Zigong Fourth People's Hospital

Ping Xu, Lin Chen, Zhongheng Zhang

Routinely collected data from critical care units at Zigong Fourth People’s Hospital, Sichuan, China for patients admitted between January 2019 and December 2020 Missing information on temperature are updated in the new version.

Published: June 30, 2022. Version: 1.1

Database Credentialed Access

DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries

Jayetri Bardhan, Anthony Colas, Kirk Roberts, et al.

DrugEHRQA is a QA dataset containing question-answers from MIMIC-III tables and discharge summaries.

question-answer qa

Published: April 12, 2022. Version: 1.0.0

Database Credentialed Access

Synthetic Acute Hypotension and Sepsis Datasets Based on MIMIC-III and Published as Part of the Health Gym Project

Nicholas Kuo, Simon Finfer, Louisa Jorm, et al.

This repository hosts the original Health Gym datasets of Acute Hypotension and Sepsis

sepsis acute hypotension synthetic dataset generative modelling wasserstein generative adversarial network reinforcement learning machine learning

Published: Feb. 23, 2022. Version: 1.0.0

Database Credentialed Access

CLIP: A Dataset for Extracting Action Items for Physicians from Hospital Discharge Notes

James Mullenbach, Yada Pruksachatkun, Sean Adler, et al.

Clinical action items annotated over MIMIC-III. 718 discharge summaries are labeled at a sentence- and character-level with multiple action labels including Appointment, Lab, Procedure, Medication, Imaging, Patient Instructions, and Other.

Published: June 21, 2021. Version: 1.0.0

Database Credentialed Access

RadGraph: Extracting Clinical Entities and Relations from Radiology Reports

Saahil Jain, Ashwin Agrawal, Adriel Saporta, et al.

RadGraph is a dataset of entities and relations in full-text chest X-ray radiology reports, which are obtained using a novel information extraction (IE) schema to capture clinically relevant information in a radiology report.

entity and relation extraction graph multi-modal natural language processing radiology

Published: June 3, 2021. Version: 1.0.0

Database Restricted Access

JSMF ACCESS intraoperative derived EEG data set

Paul Garcia, Sebastian Zinn, Jamie Sleigh

Processed intraoperative frontal EEG data from 646 surgical patients under general anaesthesia. The dataset includes derived EEG measures for studying anaesthetic brain states, emergence trajectories, and postoperative delirium screening.

anesthesia eeg delirium surgery burstsupression

Published: Sept. 21, 2026. Version: 1.0.0

Database Restricted Access

InReDD-Dataset-PAN924-Ext-BoneLoss-769

Thiago Alves Vieira de Matos, João Donato Bauman, Maria Julia Ramos, et al.

769 panoramic dental radiographs from InReDD-Dataset-PAN924 with 21,064 COCO polygon annotations for periodontal bone-loss assessment: tooth crowns plus alveolar ridge, maxillary and mandibular reference lines.

computer-aided diagnosis medical imaging alveolar ridge dentistry tooth segmentation maxilla coco format crown segmentation periodontitis panoramic radiograph mandible deep learning instance segmentation dental radiograph periodontal bone loss oral health

Published: Sept. 17, 2026. Version: 1.0.0

Database Credentialed Access

MIMIC-III-Ext-MIMIC-Patient: Structured Per-Patient JSON Records for Clinical Question Answering

Tianqi Shang, Weiqing He, Charles Zheng, et al.

MIMIC-Patient is a patient-level dataset derived from MIMIC-III, providing structured JSON representations of hospital admissions that integrate diagnoses, labs, procedures, and clinical notes to support interactive medical decision-making research.

Published: Sept. 11, 2026. Version: 1.0.0

Database Credentialed Access

MIMIC-Ext-CXR-QBA: A Structured, Tagged, and Localized Visual Question Answering Dataset with Question-Box-Answer Triplets and Scene Graphs for Chest X-ray Images

Philip Müller, Friederike Jungmann, Georgios Kaissis, et al.

We present a large-scale CXR VQA dataset derived from MIMIC-CXR with 42M QA pairs, featuring hierarchical answers, bounding boxes, and structured tags. We generated QA-pairs using LLM-based extraction from radiology reports and localization models.

chest x-rays vqa localization scene graphs

Published: Aug. 25, 2026. Version: 1.0.1

Database Open Access

BIG IDEAs Lab Glycemic Variability and Wearable Device Data

Peter Cho, Juseong Kim, Brinnae Bent, et al.

Glucose measurements and wrist-worn wearable sensor data from highnormoglycemic participants.

biomedical engineering pre-diabetes biomarkers

Published: April 13, 2026. Version: 1.1.3