Resources
116 results for "health"
Model
Credentialed Access
Clinical BERT Models Trained on Pseudo Re-identified MIMIC-III Notes
This project contains the weights of 7 different BERT models trained over a surrogate re-identified set of MIMIC-III (v1.4) notes. Each model is suitable for direct compatibility with the HuggingFace framework; users can easily load and apply the mo…
Challenge
Open Access
Early Prediction of Sepsis from Clinical Data: The PhysioNet/Computing in Cardiology Challenge 2019
Sepsis is a life-threatening condition that occurs when the body's response to infection causes tissue damage, organ failure, or death (Singer et al., 2016). In the U.S., nearly 1.7 million people develop sepsis and 270,000 people die from sepsis ea…
Database
Credentialed Access
CardioWave-Portable: a portable ECG and PPG dataset for cuffless blood pressure estimation
CardioWave-Portable is a controlled-access dataset of synchronized single-lead electrocardiography (ECG) and photoplethysmography (PPG) signals acquired with a portable card-type device and paired with cuff-based systolic and diastolic blood pressur…
Database
Credentialed Access
MIMIC-IV-Ext-EntityCoding: Clinical Named Entity Recognition and Assertion Classification Dataset for ICD Coding
This dataset provides clinical Named Entity Recognition (NER) and Assertion Classification (AC) annotations for 400 discharge summaries from MIMIC-IV-Note (v2.2), designed to support research on computer-assisted ICD coding and related clinical natu…
Database
Credentialed Access
SCRIPT CarpeDiem Dataset: demographics, outcomes, and per-day clinical parameters for critically ill patients with suspected pneumonia
Traditional approaches to analyzing episodes of patient care in the ICU examine features on presentation and outcomes on discharge, collapsing the numerous events that happen during a patient’s stay and ignoring intercurrent ICU complications or int…
Database
Contributor Review
BIDMC Metabolomic Cohort of Adults with Biopsy-Proven MASLD
Metabolic dysfunction-associated steatotic liver disease (MASLD), including its progressive form metabolic dysfunction-associated steatohepatitis (MASH), is the leading cause of chronic liver disease. Accurate delineation of the metabolites and sign…
Database
Credentialed Access
MIMIC-IV-Ext-CLIF: MIMIC-IV in the Common Longitudinal ICU data Format (CLIF)
MIMIC-IV-Ext-CLIF is a derived dataset of MIMIC-IV v3.1, transformed into the Common Longitudinal ICU data Format (CLIF). CLIF is an open-source critical care data model developed by a consortium of more than 10 US academic medical centers to standa…
Database
Credentialed Access
MIMIC-IV-Ext-MedicalBench: Evaluating Large Language Models Towards Improved Medical Concept Extraction
Medical concept extraction from electronic health records underpins many downstream applications, yet remains challenging because medically meaningful concepts, such as diagnosis, are frequently implied rather than explicitly stated in medical narra…
Database
Credentialed Access
MIMIC-IV-ECHO-Ext-LVVOLUMES-A4C-ROI: Annotated Subset of Apical Four-Chamber Echocardiography for PoCUS-Style LV Volume and Function Analysis
MIMIC-IV-ECHO-Ext-LVVOLUMES-A4C-ROIis a curated, credentialed subset of MIMIC-IV-ECHO v0.1 focusing on apical four-chamber (A4C) echocardiographic views with accompanying left-ventricular volumetric labels. The release includes 1,064 de-identified A…
Database
Credentialed Access
Antibiotic Resistance Microbiology Dataset Mass General Brigham (ARMD-MGB)
The Antibiotic Resistance Microbiology Dataset – MGB (ARMD-MGB) is a de-identified resource derived from electronic health records (EHR) that facilitates research in antimicrobial resistance (AMR). ARMD-MGB encompasses data collected from over 225,0…