Resources


Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in DICOM format with associated free-text reports.

mimic computer vision chest x-rays radiology machine learning natural language processing

Published: Sept. 19, 2019. Version: 2.0.0


Database Open Access

Sleep Heart Health Study PSG Database

Data collected for a prospective cohort study designed to investigate the relationship between sleep disordered breathing and cardiovascular disease.

multiparameter polysomnogram sleep

Published: Oct. 23, 2003. Version: 1.0.0

Visualize waveforms

Database Credentialed Access

BRATECA (Brazilian Tertiary Care Dataset): a Clinical Information Dataset for the Portuguese Language

Henrique Dias, Ana Helena Dias Pereira dos Ulbrich

Brazilian clinical dataset containing over 70,000 admissions from 10 hospitals in two Brazilian states.

exams natural language processing tertiary care prescriptions clinical notes

Published: May 13, 2022. Version: 1.0


Database Credentialed Access

RadGraph: Extracting Clinical Entities and Relations from Radiology Reports

Saahil Jain, Ashwin Agrawal, Adriel Saporta, Steven QH Truong, Du Nguyen Duong, Tan Bui, Pierre Chambon, Matthew Lungren, Andrew Ng, Curtis Langlotz, Pranav Rajpurkar

RadGraph is a dataset of entities and relations in full-text chest X-ray radiology reports, which are obtained using a novel information extraction (IE) schema to capture clinically relevant information in a radiology report.

radiology entity and relation extraction graph multi-modal natural language processing

Published: June 3, 2021. Version: 1.0.0


Database Credentialed Access

MIMIC-CXR-JPG - chest radiographs with structured labels

Alistair Johnson, Matt Lungren, Yifan Peng, Zhiyong Lu, Roger Mark, Seth Berkowitz, Steven Horng

Chest x-rays in JPG format with structured labels derived from the associated radiology report.

mimic computer vision radiology chest x-ray deep learning

Published: Nov. 14, 2019. Version: 2.0.0


Database Credentialed Access

MIMIC-III Clinical Database

Alistair Johnson, Tom Pollard, Roger Mark

MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012. The databas…

intensive care clinical machine learning critical care natural language processing

Published: Sept. 4, 2016. Version: 1.4


Database Open Access

MIMIC-IV Clinical Database Demo

Alistair Johnson, Lucas Bulgarelli, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark

An openly available subset of patients in the MIMIC-IV database.

mimic critical care electronic health record

Published: June 22, 2022. Version: 1.0


Database Restricted Access

Hospitalized patients with heart failure: integrating electronic healthcare records and external outcome data

Zhongheng Zhang, Linghong Cao, Yan Zhao, Ziyin Xu, Rangui Chen, Lukai Lv, Ping Xu

The new version added beta blockers in the dat_md.csv file. Dataset comprising hospital-level data on patients who were admitted with heart failure to Zigong Fourth People’s Hospital, Sichuan, China between 2016 and 2019.

heart failure china electronic health record

Published: May 22, 2022. Version: 1.3


Database Credentialed Access

MIMIC-III and eICU-CRD: Feature Representation by FIDDLE Preprocessing

Shengpu Tang, Parmida Davarmanesh, Yanmeng Song, Danai Koutra, Michael Sjoding, Jenna Wiens

Features and labels from MIMIC-III and eICU-CRD produced by FIDDLE, an EHR preprocessing pipeline.

preprocessing machine learning electronic health record

Published: April 28, 2021. Version: 1.0.0


Database Open Access

MIMIC-III Clinical Database Demo

Alistair Johnson, Tom Pollard, Roger Mark

An open source demo of the MIMIC-III Clinical Database

mimic critical care electronic health records

Published: April 24, 2019. Version: 1.4