Resources


Database Open Access

MIMIC-III Clinical Database Demo

Alistair Johnson, Tom Pollard, Roger Mark

An open source demo of the MIMIC-III Clinical Database

critical care electronic health records mimic

Published: April 24, 2019. Version: 1.4

Database Credentialed Access

eICU Collaborative Research Database

Tom Pollard, Alistair Johnson, Jesse Raffa, Leo Anthony Celi, Omar Badawi, Roger Mark

Multi-center database comprising deidentified health data associated with over 200,000 admissions to ICUs across the United States between 2014-2015.

telemedicine icu critical care

Published: April 15, 2019. Version: 2.0

Challenge Open Access

2018 IEEE BHI and BSN Data Challenge

Tom Pollard, Alistair Johnson, Jesse Raffa

A challenge to explore real clinical questions in critically ill patients using the MIMIC. A collaboration with the IEEE Conference on Biomedical and Health Informatics 2018 and the IEEE Conference on Body Sensor Networks.

weekend effect ieee challenge mimic

Published: Feb. 5, 2018. Version: 1.0

Model Credentialed Access

What's in a Note? Unpacking Predictive Value in Clinical Note Representations

Tristan Naumann, William Boag

Word vectors corresponding to the AMIA 2018 Informatics Summit paper of the same name.

Published: Jan. 7, 2018. Version: 0.1

Database Open Access

Clinical data from the MIMIC-II database for a case study on indwelling arterial catheters

Jesse Raffa

Dataset extracted from MIMIC-II for a tutorial on effectiveness of indwelling arterial catheters in hemodynamically stable patients with respiratory failure for mortality outcomes.

Published: Oct. 28, 2016. Version: 1.0

Database Credentialed Access

MIMIC-III Clinical Database

Alistair Johnson, Tom Pollard, Roger Mark

MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012. The databas…

clinical intensive care critical care natural language processing machine learning

Published: Sept. 4, 2016. Version: 1.4

Challenge Open Access

Is the normal heart rate chaotic?

George Moody

In its June 2008 issue, the editors of Chaos announced a new feature, "Controversial Topics in Nonlinear Dynamics". The first controversial topic to be aired is "Is the Normal Heart Rate Chaotic?". This project provides data to explore this question.

Published: Oct. 30, 2008. Version: 1.0.0

Software Open Access

De-Identification Software Package

The deid software package includes code and dictionaries for automated location and removal of protected health information (PHI) in free text from medical records.

phi deidentification anonymization

Published: Dec. 18, 2007. Version: 1.1

Challenge Open Access

Detecting and Quantifying Apnea Based on the ECG: The PhysioNet/Computing in Cardiology Challenge 2000

Obstructive sleep apnea (intermittent cessation of breathing) is a common problem with major health implications, ranging from excessive daytime drowsiness to serious cardiac arrhythmias. Obstructive sleep apnea is associated with increased risks of…

apnea challenge ecg

Published: Feb. 10, 2000. Version: 1.0.0

Database Credentialed Access

MIMIC-Ext-MIMIC-CXR-VQA: A Complex, Diverse, And Large-Scale Visual Question Answering Dataset for Chest X-ray Images

Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi

We introduce MIMIC-Ext-MIMIC-CXR-VQA, a complex, diverse, and large-scale dataset designed for Visual Question Answering (VQA) tasks within the medical domain, focusing primarily on chest radiographs.

question answering multimodal benchmark radiology evaluation visual question answering electronic health records deep learning chest x-ray machine learning

Published: July 19, 2024. Version: 1.0.0