Resources
Model Credentialed Access
Clinical-T5: Large Language Models Built Using MIMIC Clinical Text
Eric Lehman, Alistair Johnson
Published: Jan. 25, 2023. Version: 1.0.0
Database Credentialed Access
NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data
Harlin Lee, Boyue Li, Yungui Huang, Yuejie Chi, Simon Lin
eeg ehr polysomnography pediatrics clinical decision support sleep disorders sleep study electronic health records ecg
Published: Oct. 27, 2021. Version: 3.1.0
Database Credentialed Access
NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data
Harlin Lee, Boyue Li, Yungui Huang, Yuejie Chi, Simon Lin
eeg ehr polysomnography pediatrics clinical decision support sleep disorders sleep study electronic health records ecg
Published: Oct. 27, 2021. Version: 3.1.0
Database Credentialed Access
MIMIC-IV-Note: Deidentified free-text clinical notes
Alistair Johnson, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
mimic deidentification critical care electronic health record clinical notes natural language processing
Published: Jan. 6, 2023. Version: 2.2
Database Contributor Review
BRATECA (Brazilian Tertiary Care Dataset): a Clinical Information Dataset for the Portuguese Language
Henrique Dias, Ana Helena Dias Pereira dos Ulbrich
prescriptions exams tertiary care clinical notes natural language processing
Published: July 14, 2022. Version: 1.1
Database Credentialed Access
Annotated Question-Answer Pairs for Clinical Notes in the MIMIC-III Database
Xiang Yue, Xinliang Frederick Zhang, Huan Sun
clinical question answering clinical nlp clinical reading comprehension
Published: Jan. 15, 2021. Version: 1.0.0
Database Credentialed Access
SCRIPT CarpeDiem Dataset: demographics, outcomes, and per-day clinical parameters for critically ill patients with suspected pneumonia
Nikolay Markov, Catherine A Gao, Thomas Stoeger, Anna Pawlowski, Mengjia Kang, Prasanth Nannapaneni, Rogan Grant, Luke Rasmussen, Daniel Schneider, Justin Starren, Richard Wunderink, GR Scott Budinger, Alexander Misharin, Benjamin Singer, NU SCRIPT Study Investigators
Published: March 13, 2023. Version: 1.1.0
Database Credentialed Access
MIMIC-IV-Note: Deidentified free-text clinical notes
Alistair Johnson, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
mimic deidentification critical care electronic health record clinical notes natural language processing
Published: Jan. 6, 2023. Version: 2.2
Database Contributor Review
BRATECA (Brazilian Tertiary Care Dataset): a Clinical Information Dataset for the Portuguese Language
Henrique Dias, Ana Helena Dias Pereira dos Ulbrich
prescriptions exams tertiary care clinical notes natural language processing
Published: July 14, 2022. Version: 1.1
Challenge Credentialed Access
ShAReCLEF eHealth 2013: Natural Language Processing and Information Retrieval for Clinical Care
Danielle Mowery
Published: Feb. 15, 2013. Version: 1.0