Resources


Model Credentialed Access

Fine-tuning foundational models to code diagnoses from veterinary health records

Adam Kiehl, Nadia Saklou, G Joseph Strecker, et al.

Fine-tuned GatorTron LLM for veterinary diagnosis coding to 7,739 SNOMED-CT codes based on clinical summary text from the Colorado State University Veterinary Teaching Hospital.

transformers natural language processing large language models foundational models one health diagnoses snomed-ct veterinary medicine omop cdm veterinary medical records clinical coding

Published: Jan. 25, 2026. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-GPT-3_5-Generated-Discharge-Summaries-for-Low-Resource-Codes

Matúš Falis, Aryo Pradipta Gema, Hang Dong, et al.

9,606 Synthetic Discharge Summaries generated by GPT-3.5 based on combinations of ICD-10-code descriptions associated with real discharge summaries in MIMIC-IV. Focus on low resource codes.

icd coding large language model data augmentation

Published: Dec. 16, 2024. Version: 1.0.0

Software Credentialed Access

Code for generating the HAIM multimodal dataset of MIMIC-IV clinical data and x-rays

Luis R Soenksen, Yu Ma, Cynthia Zeng, et al.

Code for generating the HAIM multimodal dataset of MIMIC-IV clinical data and x-rays

database code multimodality

Published: Aug. 23, 2022. Version: 1.0.1

Model Credentialed Access

Medical AI Research Foundations: A repository of medical foundation models

Shekoofeh Azizi, Jan Freyberg, Laura Culp, et al.

Medical AI Research Foundations is a repository of medical foundation models.

Published: April 25, 2023. Version: 1.0.0

Database Restricted Access

KURIAS-ECG: a 12-lead electrocardiogram database with standardized diagnosis ontology

Hakje Yoo, Yunjin Yum, Soowan Park, et al.

The KURIAS-ECG database is a high-quality 12-lead ECG DB including standard vocabulary (SNOMED CT, OMOP-CDM), and ECG diagnoses of our DB are grouped into 10 diagnoses by applying the minnesota code.

snomed minnesota 12-lead ecg

Published: Nov. 8, 2021. Version: 1.0

Software Open Access

Gradient Algorithm

In finding an optimal stimulus waveform for inducing switches in neuronal states, analytical techniques from optimal control theory are often found to be difficult to use or extremely time intensive. Here, we present the code for a gradient-based al…

optimization

Published: Aug. 21, 2015. Version: 1.0.0

Database Restricted Access

KI EndoLIST: Endometriosis Longitudinal Individualized Symptoms Tracking Dataset

Tamar Zelovich, Vered Klaitman, Shaked Feiglin, et al.

This database contains daily symptoms of 34 endometriosis patients over 1-10 months of monitoring. It includes basic patient information, frequency and intensity of symptoms, and standard MedDRA symptom mapping for clinical interpretation.

Published: April 30, 2026. Version: 1.0.0

Software Open Access

Automated Detection and Removal of Pacing Artifacts from ECG Signal

Rajkumar Dhar, Shivangi Kewalramani, Larisa Tereshchenko

The software application (written in MATLAB) automatically detects pacing spikes (pacing artifacts) on a 12-lead ECG signal and automatically removes them. User-friendly GUI permits reviewing the results and adjusting settings to achieve perfection.

artifact cardiac pacing digital signal processing electrocardiogram

Published: April 24, 2026. Version: 1.0.0

Database Credentialed Access

INSPIRE, a publicly available research dataset for perioperative medicine

Leerang Lim, Hyung-Chul Lee

A public dataset that contains information related to surgery, anesthesia, laboratory results, medications, diagnosis, and outcomes from 50% of the patients who received surgery at Seoul National University Hospital between 2011 and 2020.

open dataset surgery multi-center perioperative medicine

Published: April 15, 2026. Version: 1.4

Database Credentialed Access

MIMIC-IV-Ext-PE: Pulmonary Embolism Labels for CT Pulmonary Angiography Radiology Reports

Barbara Lam, Omid Jafari, Peiqi Wang, et al.

CTPA (computed tomography pulmonary angiogram) radiology reports from MIMIC-IV with pulmonary embolism (PE) adjudication

Published: March 23, 2026. Version: 1.0.0