Resources


Database Credentialed Access

MIMIC-III Clinical Database

Alistair Johnson, Tom Pollard, Roger Mark

MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012. The databas…

intensive care clinical natural language processing critical care machine learning

Published: Sept. 4, 2016. Version: 1.4

Database Open Access

Brain Hemorrhage Extended (BHX): Bounding box extrapolation from thick to thin slice CT images

Eduardo Pontes Reis, Felipe Nascimento, Mateus Aranha, Fernando Mainetti Secol, Birajara Machado, Marcelo Felix, Anouk Stein, Edson Amaro

The first version of this dataset was made available in the forum of Kaggle competition 'RSNA Intracranial Hemorrhage Detection' (v1.0). Then minor corrections were implemented (v1.1).

hemorrhage intracranial

Published: July 29, 2020. Version: 1.1

Database Credentialed Access

MedNLI - A Natural Language Inference Dataset For The Clinical Domain

Chaitanya Shivade

This is a resource for training machine learning models for language inference in the medical domain.

recognizing textual entailment natural language inference

Published: Oct. 1, 2019. Version: 1.0.0

Model Credentialed Access

EntityBERT: BERT-based Models Pretrained on MIMIC-III with or without Entity-centric Masking Strategy for the Clinical Domain

Chen Lin, Timothy Miller, Steven Bethard, Guergana Savova, Dmitriy Dligach

Pretraining of models with a broad representation of biomedical terminology (PubMedBERT) on MIMIC-III corpus along with or without a novel entity-centric masking strategy.

Published: Sept. 9, 2021. Version: 1.0.0

Database Restricted Access

VinDr-SpineXR: A large annotated medical image dataset for spinal lesions detection and classification from radiographs

Hieu Huy Pham, Hieu Nguyen Trung, Ha Quy Nguyen

VinDr-SpineXR: A large annotated medical image dataset for spinal lesions detection and classification from radiographs

Published: Aug. 24, 2021. Version: 1.0.0

Database Open Access

Effect of 24-hour sleep deprivation on cerebral hemodynamics and cognitive performance

Peter Mukli, Andriy Yabluchanskiy, Tamas Csipo

We assessed the impact of 24-hour sleep deprivation on the global properties of frontal lobe functional networks and on cognitive performance. fNIRS measurements were carried out in the resting state and in response to a finger-tapping paradigm.

Published: April 26, 2021. Version: 1.0.0

Software Open Access

Random Search Toolbox

A major issue with many signal processing and machine learning algorithms is the lack of optimisation methods for determining the numerous hyper-parameters associated with the model as well as the knowledge of which hyper-parameters are relevant. Th…

Published: Nov. 4, 2014. Version: 1.0.0