Resources


Database Open Access

MIMIC-IV Clinical Database Demo on FHIR

Alex Bennett, Joshua Wiedekopf, Hannes Ulrich, Alistair Johnson

MIMIC-IV-on-FHIR is a hundred patient demo of MIMIC-IV v2.0 in the Fast Healthcare Interoperability Resources(FHIR) format. MIMIC-IV-on-FHIR provides implementers with a real-world FHIR datastore to aid in FHIR research and development.

fhir mimic electronic health records

Published: June 7, 2022. Version: 2.0

Database Open Access

MIMIC-IV Clinical Database Demo on FHIR

Alex Bennett, Joshua Wiedekopf, Hannes Ulrich, Alistair Johnson

MIMIC-IV-on-FHIR is a hundred patient demo of MIMIC-IV v2.0 in the Fast Healthcare Interoperability Resources(FHIR) format. MIMIC-IV-on-FHIR provides implementers with a real-world FHIR datastore to aid in FHIR research and development.

fhir mimic electronic health records

Published: June 7, 2022. Version: 2.0

Database Open Access

MIMIC-IV demo data in the OMOP Common Data Model

Michael Kallfelz, Anna Tsvetkova, Tom Pollard, Manlik Kwong, Gigi Lipori, Vojtech Huser, Jeffrey Osborn, Sicheng Hao, Andrew Williams

Preliminary work to transform a MIMIC-IV demo dataset to the OMOP Common Data Model

omop common data model

Published: June 21, 2021. Version: 0.9

Database Credentialed Access

Medication Extraction Labels for MIMIC-IV-Note Clinical Database

Akshay Goel, Almog Gueta, Omry Gilon, Sofia Erell, Amir Feder

Medication extraction NLP labels for 600 discharge summaries in MIMIC-IV-Note dataset.

Published: Dec. 12, 2023. Version: 1.0.0

Database Credentialed Access

Annotated MIMIC-IV discharge summaries for a study on deidentification of names

Shulammite Lim, Yuxin Xiao, Alistair Johnson, Dana Moukheiber, Lama Moukheiber, Mira Moukheiber, Marzyeh Ghassemi, Tom Pollard

Annotated MIMIC-IV discharge summaries used to explore deidentification of names

deidentification fairness

Published: July 5, 2023. Version: 1.0

Challenge Credentialed Access

MIT Critical Datathon 2023: a MIMIC-IV Derived Dataset for Pulse Oximetry Correction Models

João Matos, Tristan Struja, David S Restrepo, Luis Filipe Nakayama, Jack Gallifant, Luca Weishaupt, Nikita Mullangi, Maria Loureiro, Skyler Shapiro, Adrien Carrel, Leo Anthony Celi

A SaO2-SpO2 Pairs Dataset derived from MIMIC-IV

health equity pulse oximetry machine learning

Published: May 8, 2023. Version: 1.0.0

Database Credentialed Access

MIMIC-III Clinical Database CareVue subset

Alistair Johnson, Tom Pollard, Roger Mark

A subset of the MIMIC-III Clinical Database containing only patients admitted from 2001 - 2008.

Published: Sept. 21, 2022. Version: 1.4

Database Credentialed Access

MIMIC-Ext-MIMIC-CXR-VQA: A Complex, Diverse, And Large-Scale Visual Question Answering Dataset for Chest X-ray Images

Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi

We introduce MIMIC-Ext-MIMIC-CXR-VQA, a complex, diverse, and large-scale dataset designed for Visual Question Answering (VQA) tasks within the medical domain, focusing primarily on chest radiographs.

question answering multimodal radiology machine learning evaluation visual question answering electronic health records benchmark deep learning chest x-ray

Published: July 19, 2024. Version: 1.0.0

Database Credentialed Access

Medical Expert Annotations of Unsupported Facts in Doctor-Written and LLM-Generated Patient Summaries

Stefan Hegselmann, Shannon Shen, Florian Gierse, Monica Agrawal, David Sontag, Xiaoyi Jiang

Annotations for unsupported facts in 100 original MIMIC patient summaries (discharge instructions) and hallucinations in 100 Large Language Model (LLM) generated patient summaries labeled by two medical experts.

Published: April 28, 2024. Version: 1.0.0

Database Restricted Access

MIMIC-Eye: Integrating MIMIC Datasets with REFLACX and Eye Gaze for Multimodal Deep Learning Applications

Chihcheng Hsieh, Chun Ouyang, Jacinto C Nascimento, Joao Pereira, Joaquim Jorge, Catarina Moreira

MIMIC-Eye: Integrating MIMIC Datasets with REFLACX and Eye Gaze for Multimodal Deep Learning Applications

Published: March 23, 2023. Version: 1.0.0