Resources
5 results for "omop"
Database
Open Access
MIMIC-IV demo data in the OMOP Common Data Model
In this project, the MIMIC-IV demo database was used to create an Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) instance. The transformation was built making use of template scripts and concept mappings from a previous pr…
Database
Contributor Review
Medical Information Mart for Intensive Care Brazil (MIMIC-BR): a Brazilian Dataset of Anonymized Hospital and ICU Clinical Data
Medical Information Mart for Intensive Care Brazil (MIMIC-BR) is a database of anonymized clinical data from ICU and hospital admissions in Brazil. The dataset format and intended use match the original large, freely available database comprising de…
Database
Credentialed Access
EHRCon: Dataset for Checking Consistency between Unstructured Notes and Structured Tables in Electronic Health Records
Electronic Health Records (EHRs) are integral for storing comprehensive patient medical records, combining structured data (e.g., medications) with detailed clinical notes (e.g., physician notes). These elements are essential for straightforward dat…
Database
Restricted Access
KURIAS-ECG: a 12-lead electrocardiogram database with standardized diagnosis ontology
The 12-lead electrocardiogram (ECG) is the fundamental test used to evaluate the electrophysiological state of the heart. Most previous ECG databases use the diagnosis confirmed by experts. Therefore, ECG diagnosis is not standardized and its qualit…
Model
Credentialed Access
Fine-tuning foundational models to code diagnoses from veterinary health records
Veterinary medical records represent a large data resource for application to veterinary and One Health clinical research efforts. Use of the data is limited by interoperability challenges including inconsistent data formats and data siloing. Clinic…