Resources
33 results for "systems modeling"
Software
Open Access
A Cardiovascular Simulator for Research
We introduce here the Research CardioVascular SIMulator (RCVSIM) software in order to complement research with the experimental data sets provided by PhysioBank. The human cardiovascular model upon which RCVSIM is based includes three major componen…
Database
Open Access
Pressure, flow, and dynamic thoraco-abdominal circumferences data for adults breathing under CPAP therapy
A respiratory pressure, flow, and dynamic circumference (chest and abdominal) dataset was collected from 30 healthy adults at the University of Canterbury under Human Research Ethics Committee (HREC) ethics. Pressure and flow data was collected usin…
Database
Credentialed Access
Electrodermal Activity of Healthy Volunteers while Awake and at Rest
This dataset of electrodermal activity was collected from 11 healthy volunteer subjects who were awake and at rest in seated position. The activity was recorded from each subject's non-dominant hand for one hour at 256 Hz. Electrodermal activity mea…
Database
Open Access
Pulse Amplitudes from electrodermal activity collected from healthy volunteer subjects at rest and under controlled sedation
This dataset of electrodermal activity was collected from 11 healthy volunteer subjects who were awake and at rest in seated position and 11 different healthy volunteers who were under controlled propofol sedation. For the awake and at rest subjects…
Database
Credentialed Access
CXR-Align: A Benchmark for CXR-Report Alignment with Negations
CXR-Align is a benchmark dataset designed to evaluate vision-language processing (VLP) models' ability to accurately interpret negations in chest X-ray (CXR) reports. Negations are prevalent in medical documentation and pose significant challenges f…
Software
Open Access
CVSim
CVSim is a lumped-parameter model of the human cardiovascular system that has been developed and used for research and for teaching quantitative physiology courses at MIT and Harvard Medical School since 1984. The versions presented here have a grap…
Database
Credentialed Access
MIMIC-III-Ext-Notes
Unstructured clinical documentation, such as progress notes, contains rich contextual information critical for clinical decision-making but remains underutilized in computational research due to the limited availability of annotated datasets. The MI…
Challenge
Credentialed Access
BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization
Automatically summarizing patients’ main problems from the daily care notes in the electronic health record can help mitigate information and cognitive overload for clinicians and provide augmented intelligence via computerized diagnostic decision s…
Database
Open Access
Synthetic Mention Corpora for Disease Entity Recognition and Normalization
Named Entity Recognition (NER) and Entity Normalization (EN) are fundamental tasks in information extraction, particularly in the biomedical and clinical domains. NER identifies textual mentions of entities, while EN maps these mentions to unique id…
Database
Open Access
CPAP Pressure and Flow Data from a Local Trial of 30 Adults at the University of Canterbury
A pressure and flow dataset for CPAP (continuous positive airway pressure) breathing obtained from 30 subjects for model-based identification of patient-specific lung mechanics using a specially designed sensor system comprising an array of differen…