Resources


Software Open Access

A Cardiovascular Simulator for Research

We introduce here the Research CardioVascular SIMulator (RCVSIM) software in order to complement research with the experimental data sets provided by PhysioBank. The human cardiovascular model upon which RCVSIM is based includes three major componen…

cardiovascular simulation

Published: Sept. 19, 2001. Version: 1.0.0

Database Open Access

Pressure, flow, and dynamic thoraco-abdominal circumferences data for adults breathing under CPAP therapy

Ella Frances Sophia Guy, Jennifer Knopp, Theodore Lerios, et al.

Dataset of pressure, flow, and dynamic abdominal and chest circumference for healthy people breathing with CPAP. Data was collected with PEEP settings of 0 (ZEEP), 4, and 8cmH2O at normal/resting, panting/short and deep/long breath patterns/rates.

Published: Jan. 25, 2023. Version: 1.0.0

Database Credentialed Access

Electrodermal Activity of Healthy Volunteers while Awake and at Rest

Sandya Subramanian, Patrick Purdon, Riccardo Barbieri, et al.

This database of electrodermal activity was collected from 11 healthy volunteer subjects who were awake and at rest in seated position and 11 (different) healthy volunteer subjects who were under computer-controlled propofol sedation.

autonomic nervous system anesthesia sweat gland activity sympathetic nervous system propofol electrodermal activity

Published: Aug. 26, 2021. Version: 2.0

Database Open Access

Pulse Amplitudes from electrodermal activity collected from healthy volunteer subjects at rest and under controlled sedation

Sandya Subramanian, Patrick Purdon, Riccardo Barbieri, et al.

This database of pulse times and amplitudes from electrodermal activity was collected from 11 healthy volunteer subjects who were awake and at rest and 11 (different) healthy volunteer subjects who were under controlled propofol sedation.

autonomic nervous system anesthesia sweat gland activity sympathetic nervous system propofol electrodermal activity

Published: June 30, 2021. Version: 1.0

Database Credentialed Access

CXR-Align: A Benchmark for CXR-Report Alignment with Negations

Hanbin Ko

CXR-Align is a benchmark dataset created to evaluate vision-language models' capability to interpret negations in chest X-ray (CXR) reports, featuring systematically modified reports from MIMIC-CXR.

Published: Aug. 21, 2025. Version: 1.0.0

Software Open Access

CVSim

CVSim is a lumped-parameter model of the human cardiovascular system that has been developed and used for research and for teaching quantitative physiology courses at MIT and Harvard Medical School since 1984. The versions presented here have a grap…

cardiovascular simulation

Published: March 16, 2007. Version: 1.0.0

Database Credentialed Access

MIMIC-III-Ext-Notes

Darren Liu, Monique Bouvier, Delgersuren Bold, et al.

We evaluated general large language models' performance in clinical information extraction on MIMIC-III notes.

Published: Feb. 27, 2026. Version: 1.0.0

Challenge Credentialed Access

BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization

Yanjun Gao, Dmitriy Dligach, Timothy Miller, et al.

This is the data storage for BioNLP Workshop Shared Task 1A: Problem List Summarization.

bionlp clinical natural language processing electronic health record summarization

Published: Nov. 12, 2023. Version: 2.0.0

Database Open Access

Synthetic Mention Corpora for Disease Entity Recognition and Normalization

Kuleen Sasse, John David Osborne

We present the Synthetic Mention Corpora for Disease Entity Recognition and Normalization, containing 128000 disease mentions from the UMLS disorder group, generated by an LLM. This corpus aims to improve these tasks in biomedical and clinical texts.

nlp named entity recognition data augmentation entity normalization machine learning

Published: Feb. 3, 2025. Version: 1.0.0

Database Open Access

CPAP Pressure and Flow Data from a Local Trial of 30 Adults at the University of Canterbury

Ella Guy, Jennifer Knopp, Geoff Chase

A pressure and flow dataset was collected from a trial of 30 adults at the University of Canterbury undergoing CPAP therapy for a variety of instructed breath rates at PEEP levels of 4cmH2O and 7cmH2O.

peep cpap respiratory mechanics pulmonary mechanics respiratory modelling biomedical engineering

Published: March 24, 2022. Version: 1.0.1