Resources


Database Credentialed Access

Chest X-ray segmentation images based on MIMIC-CXR

Li-Ching Chen, Po-Chih Kuo, Ryan Wang, Judy Gichoya, Leo Anthony Celi

A chest x-rays segmentation dataset derived from MIMIC-CXR based on deep learning algorithm and human examination.

segmentation chest x-rays cxr

Published: Aug. 18, 2022. Version: 1.0.0


Software Open Access

Waveform Database Software Package (WFDB) for Python

Chen Xie, Lucas McCullum, Alistair Johnson, Tom Pollard, Brian Gow, Benjamin Moody

Tools for working with waveforms in Python.

wfdb waveform python

Published: Aug. 9, 2022. Version: 4.0.0


Database Open Access

Cerebral perfusion and cognitive decline in type 2 diabetes

Vera Novak, Rodrigo Quispe, Charles Saunders

Dataset collected during a study on type 2 diabetes on brain blood flow, vasoreactivity and functional outcomes (gait and balance) using TCD, MRI perfusion and foot pressure distribution and gait measures.

vasoregulation brain diabetes

Published: Aug. 5, 2022. Version: 1.0.1

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Database Open Access

Cerebromicrovascular Disease in Elderly with Diabetes

Vera Novak, Rodrigo Quispe

Type 2 diabetes increases risk for cerebrovascular disease, cognitive and mobility decline in older people. This project evaluated relationship between diabetes, inflammation cerebrovascular reactivity and functional outcomes.

gait and balance brain perfusion inflammation type 2 diabetes cerebromiscovascular disease cerebral vasoreactivity brain atrophy perfusion mri

Published: Aug. 5, 2022. Version: 1.0.1

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Challenge Open Access

Will Two Do? Varying Dimensions in Electrocardiography: The PhysioNet/Computing in Cardiology Challenge 2021

Matthew Reyna, Nadi Sadr, Annie Gu, Erick Andres Perez Alday, Chengyu Liu, Salman Seyedi, Amit Shah, Gari Clifford

Will Two Do? Varying Dimensions in Electrocardiography: the PhysioNet/Computing in Cardiology Challenge 2021

challenge cardiac abnormalities multilead ecgs classification competition

Published: July 29, 2022. Version: 1.0.3

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Challenge Open Access

Classification of 12-lead ECGs: The PhysioNet/Computing in Cardiology Challenge 2020

Erick Andres Perez Alday, Annie Gu, Amit Shah, Chengyu Liu, Ashish Sharma, Salman Seyedi, Ali Bahrami Rad, Matthew Reyna, Gari Clifford

The goal of the 2020 PhysioNet - Computing in Cardiology Challenge is to design and implement a working, open-source algorithm that can automatically identify cardiac abnormalities in 12-lead ECG recordings.

Published: July 29, 2022. Version: 1.0.2

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Database Credentialed Access

Learning to Ask Like a Physician: a Discharge Summary Clinical Questions (DiSCQ) Dataset

Eric Lehman

Dataset of questions asked by medical experts about patients. Medical experts will read a discharge summary line-by-line and (1) ask any question that they may have and (2) record what in the text "triggered" them to ask their question.

machine learning question answering question generation

Published: July 28, 2022. Version: 1.0


Database Credentialed Access

GOSSIS-1-eICU, the eICU-CRD subset of the Global Open Source Severity of Illness Score (GOSSIS-1) dataset

Jesse Raffa, Alistair Johnson, Tom Pollard, Omar Badawi

GOSSIS-1 is an in-hospital mortality prediction algorithm for critical care patients. GOSSIS-1 was trained using data from three countries. This dataset corresponds with the USA subset of the GOSSIS-1 dataset for the 2022 publication below.

icu critical care severity of illness global gossis apache mortality prediction benchmarking

Published: July 20, 2022. Version: 1.0.0


Database Open Access

Simultaneous physiological measurements with five devices at different cognitive and physical loads

Marcus Vollmer, Dominic Bläsing, Julian Elias Reiser, Maria Nisser, Anja Buder

Dataset to support comparison of usability and accuracy from simultaneous measurements collected from 13 subjects including five devices: NeXus-10 MKII, eMotion Faros 360°, Hexoskin Hx1, SOMNOTouch NIBP, Polar RS800 Multi.

multiparameter holter photoplethysmogram noise heart rate accelerometer temperature movement hrv respiration ecg

Published: July 20, 2022. Version: 1.0.1

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Database Contributor Review

BRATECA (Brazilian Tertiary Care Dataset): a Clinical Information Dataset for the Portuguese Language

Henrique Dias, Ana Helena Dias Pereira dos Ulbrich

Brazilian clinical dataset containing over 70,000 admissions from 10 hospitals in two Brazilian states.

prescriptions exams clinical notes tertiary care natural language processing

Published: July 14, 2022. Version: 1.1