Resources
Database Credentialed Access
MS-CXR-T: Learning to Exploit Temporal Structure for Biomedical Vision-Language Processing
Shruthi Bannur, Stephanie Hyland, Qianchu Liu, Fernando Pérez-García, Max Ilse, Daniel Coelho de Castro, Benedikt Boecking, Harshita Sharma, Kenza Bouzid, Anton Schwaighofer, Maria Teodora Wetscherek, Hannah Richardson, Tristan Naumann, Javier Alvarez Valle, Ozan Oktay
cxr disease progression vision-language processing multimodal radiology chest x-ray
Published: March 17, 2023. Version: 1.0.0
Database Credentialed Access
MS-CXR: Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing
Benedikt Boecking, Naoto Usuyama, Shruthi Bannur, Daniel Coelho de Castro, Anton Schwaighofer, Stephanie Hyland, Maria Teodora Wetscherek, Tristan Naumann, Aditya Nori, Javier Alvarez Valle, Hoifung Poon, Ozan Oktay
vision-language processing chest x-ray
Published: May 16, 2022. Version: 0.1
Software Open Access
FECGSYN Toolbox
The FECGSYN toolbox is a reference open-source platform for NI-FECG research, product of a collaboration between the Department of Engineering Science, University of Oxford (DES-OX), the Institute of Biomedical Engineering, TU Dresden (IBMT-TUD) and…
Published: Nov. 4, 2014. Version: 1.0.0
Database Open Access
Brno University of Technology Smartphone PPG Database (BUT PPG)
Andrea Nemcova, Radovan Smisek, Eniko Vargova, Lucie Maršánová, Martin Vitek, Lukas Smital, Marina Filipenska, Pavlina Sikorova, Pavel Gálík
heart rate artificial intelligence ppg ecg acc signal quality assessment annotations accelerometric data electrocardiogram photoplethysmography
Published: Aug. 23, 2024. Version: 2.0.0
Model Credentialed Access
Me-LLaMA: Foundation Large Language Models for Medical Applications
Qianqian Xie, Qingyu Chen, Aokun Chen, Cheng Peng, Yan Hu, Fongci Lin, Xueqing Peng, Jimin Huang, Jeffrey Zhang, Vipina Keloth, Xinyu Zhou, Huan He, Lucila Ohno-Machado, Yonghui Wu, Hua Xu, Jiang Bian
Published: June 5, 2024. Version: 1.0.0
Model Credentialed Access
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
Sunjun Kweon, Junu Kim, Jiyoun Kim, Sujeong Im, Eunbyeol Cho, Seongsu Bae, Jungwoo Oh, Gyubok Lee, Jong Hak Moon, Seng Chan You, Seungjin Baek, Chang Hoon Han, Yoon Bin Jung, Yohan Jo, Edward Choi
clinical notes large language model synthetic clinical notes synthetic notes asclepius open-source llm clinical llm
Published: March 25, 2024. Version: 1.1.0
Database Credentialed Access
ODD: A Benchmark Dataset for the NLP-based Opioid Related Aberrant Behavior Detection
Sunjae Kwon, Xun Wang, Weisong Liu, Emily Druhl, Minhee Sung, Joel Reisman, Wenjun Li, Robert Kerns, William Becker, Hong Yu
substance use natural language processing opioid related aberrant behavior
Published: Jan. 11, 2024. Version: 1.0.0
Software Open Access
Transformer-DeID: Deidentification of free-text clinical notes with transformers
Callandra Moore, Lucas Bulgarelli, Tom Pollard, Alistair Johnson
deidentification neural networks transformers
Published: Nov. 2, 2023. Version: 1.0.0
Database Open Access
Integration of Electroencephalogram and Eye-Gaze Datasets for Performance Evaluation in Fundamentals of Laparoscopic Surgery (FLS) Tasks
Somayeh B Shafiei, Saeed Shadpour
Published: Aug. 23, 2023. Version: 1.0.0
Visualize waveformsDatabase Open Access
Electroencephalogram and eye-gaze datasets for robot-assisted surgery performance evaluation
Somayeh B Shafiei, Saeed Shadpour, James Mohler, Mehdi Seilanian Toussi, Philippa Doherty, Zhe Jing
Published: July 14, 2023. Version: 1.0.0
Visualize waveforms