Resources


Database Open Access

Motion and heart rate from a wrist-worn wearable and labeled sleep from polysomnography

Olivia Walch

Contains motion data and heart rate measurements from Apple Watches from sleeping people undergoing polysomnography (PSG), and the labeled sleep stages scored from the PSG recordings (wake, N1-3 sleep, REM sleep).

sleep polysomnography

Published: Oct. 8, 2019. Version: 1.0.0


Database Credentialed Access

MedNLI - A Natural Language Inference Dataset For The Clinical Domain

Chaitanya Shivade

This is a resource for training machine learning models for language inference in the medical domain.

natural language inference recognizing textual entailment

Published: Oct. 1, 2019. Version: 1.0.0


Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in DICOM format with associated free-text reports.

mimic natural language processing machine learning computer vision radiology chest x-rays

Published: Sept. 19, 2019. Version: 2.0.0


Database Open Access

PhysioZoo - mammalian NSR databases

Ori Shemla, Joachim Behar

PhysioZoo is a collaborative platform dedicated to the study of the heart rate variability in electrophysiological recordings from mammals

ecg heart rate variabillity electrophysiology mammals

Published: Aug. 27, 2019. Version: 1.0.0

Visualize waveforms

Challenge Open Access

Early Prediction of Sepsis from Clinical Data -- the PhysioNet Computing in Cardiology Challenge 2019

Matthew Reyna, Chris Josef, Russell Jeter, Supreeth Shashikumar, Benjamin Moody, Ashish Sharma, Shamim Nemati, Gari Clifford

The 2019 PhysioNet Computing in Cardiology Challenge invites participants to predict sepsis in clinical data

prediction challenge sepsis

Published: Aug. 5, 2019. Version: 1.0.0


Database Open Access

Computed Tomography Images for Intracranial Hemorrhage Detection and Segmentation

Murtadha Hssayeni

Head computed tomography scans with intracranial hemmorhage segmentation.

jpg segmentation computed tomography intracranial hemmorhage

Published: Aug. 1, 2019. Version: 1.0.0


Software Open Access

Logistic Regression-HSMM-based Heart Sound Segmentation

David Springer

Heart sound segmentation code, based on a duration-dependent hidden Markov model, extended with the use of logistic regression for emission probability estimation and an enhanced Viterbi algorithm.

Published: July 29, 2019. Version: 1.0


Database Open Access

eICU Collaborative Research Database Demo

Alistair Johnson, Tom Pollard, Omar Badawi, Jesse Raffa

An openly available subset of the eICU Collaborative Research Database.

critical care eicu open data medical informatics

Published: July 15, 2019. Version: 2.0


Database Open Access

MIMIC-III Clinical Database Demo

Alistair Johnson, Tom Pollard, Roger Mark

An open source demo of the MIMIC-III Clinical Database

mimic critical care electronic health records

Published: April 24, 2019. Version: 1.4


Database Credentialed Access

MedNLI for Shared Task at ACL BioNLP 2019

Chaitanya Shivade

MedNLI test set for Shared Task at BioNLP 2019

mimic natural language inference recognizing textual entailment

Published: April 17, 2019. Version: 1.0.0