Resources


Database Restricted Access

Pulmonary Edema Severity Grades Based on MIMIC-CXR

Ruizhi Liao, Geeticka Chauhan, Polina Golland, Seth Berkowitz, Steven Horng

Pulmonary edema metadata and labels for MIMIC-CXR

Published: Feb. 9, 2021. Version: 1.0.1

Database Credentialed Access

MedVAL-Bench: Expert-Annotated Medical Text Validation Benchmark

Asad Aali, Vasiliki Bikia, Maya Varma, Nicole Chiou, Sophie Ostmeier, Arnav Singhvi, Magdalini Paschali, Ashwin Kumar, Andrew Johnston, Karimar Amador Martinez, Eduardo Perez Guerrero, Paola Cruz Rivera, Sergios Gatidis, Christian Bluethgen, Eduardo Pontes Reis, Eddy Zandee van Rilland, Poonam Hosamani, Kevin Keet, Minjoung Go, Evelyn Ling, Curtis Langlotz, Roxana Daneshjou, Jason Hom, Sanmi Koyejo, Emily Alsentzer, Akshay Chaudhari

MedVAL-Bench is the first large-scale physician-validated benchmark for medical text validation, spanning 6 diverse medical tasks and containing 840 language model-generated outputs annotated by 12 physicians with error assessments and risk grades.

Published: Nov. 3, 2025. Version: 1.0.0

Database Open Access

MIMIC-IV Clinical Database Demo on FHIR

Alex Bennett, Hannes Ulrich, Joshua Wiedekopf, Piotr Szul, John Grimes, Alistair Johnson

The MIMIC-IV Clinical Database Demo on FHIR is a 100 patient subset of the MIMIC-IV v2.2 and MIMIC-IV-ED v2.2 clinical databases converted into the Fast Healthcare Interoperability Resources (FHIR) format.

fhir electronic health records mimic

Published: Aug. 27, 2025. Version: 2.1.0

Database Restricted Access

Microbiological, Immunological and Biochemical Characteristics of the Development of Ventilator Associated Pneumonia

Natalia Sanabria-Herrera, Ingrid Gisell Bustos Moya, Luis Felipe Reyes

This study explores the respiratory microbiome's role in nosocomial lower respiratory tract infections in ICU patients. Conducted in Chía, Colombia, revealing the microbiome's impact on disease progression.

Published: June 24, 2025. Version: 1.1.0

Database Credentialed Access

MIMIC-III-Ext-tPatchGNN

Chenlong Yin, Weijia Zhang

The processed MIMIC-III dataset for the benchmark of Irregular Multivariate Time Series Forecasting: A Transformable Patching Graph Neural Networks Approach.

Published: April 9, 2025. Version: 1.0.0

Database Open Access

Leipzig Heart Center ECG-Database: Arrhythmias in Children and Patients with Congenital Heart Disease

Sophia Klehs, Daniel Franke, Bayhas Alhamad, Roman Gebauer, Linus Teich, Tobias Teich, Christian Paech

This annotated ECG database for paediatric and CHD patients features 12-lead and intracardiac recordings, supporting advanced diagnostic algorithms.

artificial intelligence 12-lead ecg arrhythmias chd intracardiac recordings annotated congenital heart disease

Published: March 19, 2025. Version: 1.0.0

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Database Restricted Access

TAME Pain: Trustworthy AssessMEnt of Pain from Speech and Audio for the Empowerment of Patients

Tu-Quyen Dao, Eike Schneiders, Jennifer Williams, John Robert Bautista, Tina Seabrooke, Ganesh Vigneswaran, Rishik Kolpekwar, Ritwik Vashistha, Arya Farahi

TAME Pain is a dataset that captures acoustic signals of pain and is augmented by annotating every sentence the participant speaks with details such as background and foreground noise, speech errors, and non-speech vocal features.

audio speech pain cold pressor task

Published: Jan. 21, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-CXR Database

Alistair Johnson, Tom Pollard, Roger Mark, Seth Berkowitz, Steven Horng

Chest radiographs in DICOM format with associated free-text reports.

computer vision chest x-rays natural language processing machine learning radiology mimic

Published: July 23, 2024. Version: 2.1.0

Database Credentialed Access

RadCoref: Fine-tuning coreference resolution for different styles of clinical narratives

Yuxiang Liao, Hantao Liu, Irena Spasic

RadCoref is a small subset of MIMIC-CXR with manually annotated coreference mentions and clusters. Based on the annotated data, we fine-tuned a deep neural model and used it to annotate the whole MIMIC-CXR dataset. Both data are available.

natural language processing coreference resolution radiology

Published: Jan. 30, 2024. Version: 1.0.0

Database Open Access

Surface electromyographic signals collected during long-lasting ground walking of young able-bodied subjects

Francesco Di Nardo, Christian Morbidoni, Sandro Fioretti

The dataset is composed of long-lasting surface electromyographic (sEMG) signals recorded from ten muscles during ground walking of 31 young able-bodied subjects in Movement Analysis Lab, Università Politecnica delle Marche, Ancona, Italy.

biomedical signals muscle recruitment surface emg signal walking gait analysis

Published: Jan. 9, 2024. Version: 1.0.1

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