Resources


Database Credentialed Access

MIMIC-III and eICU-CRD: Feature Representation by FIDDLE Preprocessing

Shengpu Tang, Parmida Davarmanesh, Yanmeng Song, Danai Koutra, Michael Sjoding, Jenna Wiens

Features and labels from MIMIC-III and eICU-CRD produced by FIDDLE, an EHR preprocessing pipeline.

preprocessing electronic health record machine learning

Published: April 28, 2021. Version: 1.0.0

Database Open Access

Mental workload during n-back task captured by TransCranial Doppler (TCD) sonography and functional Near-Infrared Spectroscopy (fNIRS) monitoring

Peter Mukli, Andriy Yabluchanskiy, Tamas Csipo

Functional near-infrared spectroscopy and transcranial doppler sonography were used to measure changes in cerebral hemodynamics during cognitive stimulation.

Published: April 21, 2021. Version: 1.0

Database Credentialed Access

National Institutes of Health Stroke Scale (NIHSS) Annotations for the MIMIC-III Database

Jiayang Wang, Xiaoshuo Huang, Lin Yang, Jiao Li

A dataset of annotated NIHSS scale items and corresponding scores from stroke patients discharge summaries in MIMIC-III.

Published: Jan. 25, 2021. Version: 1.0.0

Database Credentialed Access

AMR-UTI: Antimicrobial Resistance in Urinary Tract Infections

Michael Oberst, Soorajnath Boominathan, Helen Zhou, Sanjat Kanjilal, David Sontag

AMR-UTI is a freely accessible dataset, derived from electronic health record (EHR) information on over 100,000 urinary tract infections (UTI) treated at Massachusetts General Hospital and Brigham & Women's Hospital in Boston, MA, USA.

antibiotic resistance causal inference policy learning antimicrobial resistance urinary tract infection clinical decision support machine learning

Published: Nov. 4, 2020. Version: 1.0.0

Database Restricted Access

Computed Tomography Images for Intracranial Hemorrhage Detection and Segmentation

Murtadha Hssayeni

Head computed tomography (CT) scans with intracranial hemorrhage (ICH) segmentation, ICH subtypes and skull fracture.

computed tomography skull fracture ich intracranial hemmorhage ct scans segmentation nifti

Published: March 10, 2020. Version: 1.3.1

Database Open Access

ERP-based Brain-Computer Interface recordings

Data generated as part of a study aimed at identifying the factors limiting the performance of brain-computer interfaces based on event-related potentials.

neuroelectric brain-computer interface

Published: March 4, 2014. Version: 1.0.0

Visualize waveforms

Database Open Access

Myocardial perfusion scintigraphy image database

Wesley Calixto, Solange Nogueira, Fernanda Luz, Thiago Fellipe Ortiz de Camargo

This database provides a collection of myocardial perfusion scintigraphy images. The dataset encompasses a diversity of clinical cases, including various perfusion patterns and underlying cardiac conditions.

nifti artificial intelligence anonymization clinical diagnosis myocardial perfusion systems modeling myocardial perfusion scintigraphy dicom metadata ventricular walls coronary artery disease convolutional neural networks automated segmentation

Published: Sept. 9, 2025. Version: 1.0.0

Database Restricted Access

MIMIC-IV-Ext-Apixaban-Trial-Criteria-Questions

Elizabeth Woo, Michael Craig Burkhart, Emily Alsentzer, Brett Beaulieu-Jones

We created 23 questions resembling eligibility criteria from the apixaban clinical trial and evaluated them on a random sample of 100 patient notes from MIMIC-IV. We release the 2300 total question-answer pairs as a dataset here.

clinical q and a evaluation set clinical trial eligibility

Published: April 30, 2025. Version: 1.0.0

Database Open Access

SHDB-AF: a Japanese Holter ECG database of atrial fibrillation

Kenta Tsutsui, Shany Biton Brimer, Joachim Behar

Holter ECG database from Japan, containing data from 100 unique patients with paroxysmal AF including expert annotations of Supraventricular arrhythmias at the beat level.

atrial fibrillation ecg holters

Published: April 16, 2025. Version: 1.0.1

Database Credentialed Access

AIPatient KG: MIMIC-III and CORAL Electronic Health Records based Patient Knowledge Graph

Lizhou Fan, Huizi Yu

This project integrates MIMIC-III and CORAL electronic health records into knowledge graphs to improve medical analysis and enhance decision-making capabilities. Resources include two knowledge graph snapshots and two question-and-answering datasets.

Published: April 15, 2025. Version: 1.0.0