Resources


Database Open Access

Synthetic Mention Corpora for Disease Entity Recognition and Normalization

Kuleen Sasse, John David Osborne

We present the Synthetic Mention Corpora for Disease Entity Recognition and Normalization, containing 128000 disease mentions from the UMLS disorder group, generated by an LLM. This corpus aims to improve these tasks in biomedical and clinical texts.

nlp machine learning named entity recognition data augmentation entity normalization

Published: Feb. 3, 2025. Version: 1.0.0

Database Restricted Access

CXRGraph: Using Information Extraction to Normalize the Training Data for Automatic Radiology Report Generation

Yuxiang Liao, Hoisang Heung, Hantao Liu, Irena Spasic

CXRGraph is a structured radiology report dataset built upon RadGraph and tailored for the Automatic Radiology Report Generation task. It can identify more task-relevant information such as abnormalities and hallucinated prior references.

relation extraction information extraction natural language processing named entity recognition structured radiology report

Published: Feb. 3, 2025. Version: 1.0.0

Database Credentialed Access

FFA-IR: Towards an Explainable and Reliable Medical Report Generation Benchmark

Mingjie Li, Wenjia Cai, Rui Liu, Yuetian Weng, Tengfei Liu, Cong Wang, xin chen, zhong liu, Caineng Pan, Mengke Li, yingfeng zheng, Yizhi Liu, Flora Salim, Karin Verspoor, Xiaodan Liang, Xiaojun Chang

Benchmark dataset for report generation based on fundus fluorescein angiography images and reports.

fundus fluorescein angiography medical report generation vision and language explainable and reliable evaluation

Published: Jan. 21, 2025. Version: 1.1.0

Database Restricted Access

MIMIC-IV-Ext-DiReCT

Bowen Wang, Jiuyang Chang, Yiming Qian

A diagnostic reasoning dataset designed to evaluate the performance of large language models in aligning with human doctors when making diagnoses from clinical notes.

Published: Jan. 21, 2025. Version: 1.0.0

Database Restricted Access

A database of hand kinematics, high-density sEMG of forearm and wrist for motion intent recognition

Zeming Zhao, Weichao Guo, Zeyu Zhou

A database of hand kinematics, high-density sEMG of forearm and wrist.

Published: Jan. 17, 2025. Version: 1.0.0

Database Contributor Review

Salzburg Intensive Care database (SICdb), a freely accessible intensive care database

Niklas Rodemund, Andreas Kokoefer, Bernhard Wernly, Crispiana Cozowicz

The SICdb dataset, version 1.0.8 contains 27350 admissions to an ICU in an Austrian tertiary care institution.

clinical intensive care critical care machine learning open data

Published: Sept. 10, 2024. Version: 1.0.8

Database Restricted Access

Multimodal Physiological Indices During Surgery Under Anesthesia

Sandya Subramanian, Bryan Tseng, Riccardo Barbieri, Emery Brown

Multimodal physiological indices collected during surgery when patients were under anesthesia

anesthesia nociception

Published: Aug. 23, 2024. Version: 1.0

Database Open Access

ScientISST MOVE: Annotated Wearable Multimodal Biosignals recorded during Everyday Life Activities in Naturalistic Environments

João Areias Saraiva, Mariana Abreu, Ana Sofia Carmo, Hugo Plácido da Silva, Ana Fred

Multimodal (ECG, EMG, EDA, PPG, TEMP, ACC) biosignal dataset of everyday activities. Created with 3 wearable devices based on ScientISST Sense and Empatica E4.

greet lift uncontrolled environments run jump gesticulate walk wearable multimodal

Published: March 25, 2024. Version: 1.0.1

Database Open Access

Regulation of Brain Cognitive States through Auditory, Gustatory, and Olfactory Stimulation with Wearable Monitoring

Hamid Fekri Azgomi, Luciano Branco, Md Rafiul Amin, Saman Khazaei, Rose T Faghih

This dataset explores safe actuation (music, perfume, coffee) for enhancing cognitive states. It includes subjects’ responses, reaction times, and physiological data (EDA, HR, BVP, PPG, temperature, accelerometer, EEG) during n-back memory tasks.

eeg music signal processing heart rate physiological signals neurophysiology coffee empatica n-back experiments perfume wearable devices control systems memory task muse closed-loop brain cognitive states skin conductance

Published: Dec. 18, 2023. Version: 1.0.0

Database Open Access

SCG-RHC: Wearable Seismocardiogram Signal and Right Heart Catheter Database

Michael Chan, Liviu Klein, Joanna Fan, Omer Inan

This is the first public dataset that contains simultaneous recordings of Right Heart Catheter data (pressure) and chest-worn wearable patch data (electrocardiogram and seismocardiogram signals).

Published: March 31, 2023. Version: 1.0.0

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