Resources


Database Credentialed Access

Phenotype Annotations for Patient Notes in the MIMIC-III Database

Edward Moseley, Leo Anthony Celi, Joy Wu, et al.

Clinical notes, annotated by at least two expert annotators for over ten patient phenotypes, including advanced cancer, substance abuse, and treatment non-adherence.

patient classification natural language processing

Published: March 5, 2020. Version: 1.20.3

Database Open Access

Tappy Keystroke Data

This is the keystroke dataset for the study titled 'High-accuracy detection of early Parkinson's Disease using multiple characteristics of finger movement while typing'. This research report is currently under review for publication by P…

parkinsons neuroelectric movement

Published: Oct. 20, 2017. Version: 1.0.0

Database Open Access

Clinical data from the MIMIC-II database for a case study on indwelling arterial catheters

Jesse Raffa

Dataset extracted from MIMIC-II for a tutorial on effectiveness of indwelling arterial catheters in hemodynamically stable patients with respiratory failure for mortality outcomes.

Published: Oct. 28, 2016. Version: 1.0

Challenge Credentialed Access

ShAReCLEF eHealth 2013: Natural Language Processing and Information Retrieval for Clinical Care

Danielle Mowery

2013 ShARe/CLEF eHealth Evaluation Lab: Natural Language Processing and Information Retrieval for Clinical Care (Tasks 1 and 2).

natural language processing

Published: Feb. 15, 2013. Version: 1.0

Database Credentialed Access

MIMIC-IV-Echo: Echocardiogram Matched Subset

Brian Gow, Tom Pollard, Nathaniel Greenbaum, et al.

The MIMIC-IV-ECHO module contains structured measurements from over 200,000 echocardiograms and more than 500,000 echocardiogram DICOM files. Patients overlap with those in the MIMIC-IV Clinical Database.

Published: Aug. 25, 2026. Version: 1.0.1

Database Open Access

Minute level step counts and physical activity data from the National Health and Nutrition Examination Survey (NHANES) 2011-2014

Lily Koffman, John Muschelli

Minute level step counts obtained from five step counting algorithms for raw accelerometry data, and minute level Activity Counts, MIMS, wear predictions, and wear flags for all participants who wore accelerometers in NHANES 2011-2014.

physical activity nhanes steps accelerometry

Published: Aug. 6, 2026. Version: 1.0.2

Database Credentialed Access

Embedding-Based Representations for BRSET and mBRSET

David Restrepo, Chenwei Wu, Michael Morley, et al.

Precomputed image embeddings for the BRSET and mBRSET Brazilian retinal datasets to support efficient, secure, and equitable ophthalmic AI research, enabling tasks such as classification, clustering, multimodal modeling, and fairness analysis.

computer vision vector embeddings ophthalmology

Published: March 30, 2026. Version: 1.0.0

Database Credentialed Access

MIMIC-CXR-Ext-ILS: Lesion Segmentation Masks and Instruction-Answer Pairs for Chest X-rays

Geon Choi, Hangyul Yoon, Hyunju Shin, et al.

Instruction-guided lesion segmentation data for chest X-rays, including 1.1M instruction-answer pairs and 91K segmentation masks covering seven major lesion types.

chest x-ray segmentation text-guided segmentation lesion segmentation

Published: March 25, 2026. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-MedicalBench: Evaluating Large Language Models Towards Improved Medical Concept Extraction

Zhichao Yang, Gregory Lyng, Sanjit Batra, et al.

This dataset is an evidence‑grounded benchmark built on MIMIC‑IV discharge summaries that evaluates how well large language models can verify ICD‑10 medical concepts, including implicitly documented diagnoses, by identifying supporting text evidence.

Published: March 23, 2026. Version: 1.0.0

Database Open Access

Longitudinal Cylinder Rearing Behavioral Data in a Mouse Stroke Model Across Multiple Drug Treatments

Yunhao Jiang, Shreyas Venkitaraman, Hee Ra Jung, et al.

This dataset provides cylinder rearing video and behavioral scoring data from 59 mice undergoing stroke and drug treatments.

Published: March 4, 2026. Version: 1.0.0