Resources
Database Credentialed Access
DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries
Jayetri Bardhan, Anthony Colas, Kirk Roberts, Daisy Zhe Wang
Published: April 12, 2022. Version: 1.0.0
Database Credentialed Access
Annotation dataset of social determinants of health from MIMIC-III Clinical Care Database
Marco Guevara, Shan Chen, Spencer Thomas, Danielle Bitterman
natural language processing social determinants of health
Published: Nov. 24, 2023. Version: 1.0.0
Database Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi
clinical notes substance use opioid use disorder natural language processing
Published: Feb. 8, 2023. Version: 1.0.0
Database Credentialed Access
Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization
Yanjun Gao, John Caskey, Timothy Miller, Brihat Sharma, Matthew Churpek, Dmitriy Dligach, Majid Afshar
Published: Sept. 30, 2022. Version: 1.0.0
Database Credentialed Access
Learning to Ask Like a Physician: a Discharge Summary Clinical Questions (DiSCQ) Dataset
Eric Lehman
machine learning question generation question answering
Published: July 28, 2022. Version: 1.0
Database Credentialed Access
MIMIC-III and eICU-CRD: Feature Representation by FIDDLE Preprocessing
Shengpu Tang, Parmida Davarmanesh, Yanmeng Song, Danai Koutra, Michael Sjoding, Jenna Wiens
preprocessing machine learning electronic health record
Published: April 28, 2021. Version: 1.0.0
Database Credentialed Access
National Institutes of Health Stroke Scale (NIHSS) Annotations for the MIMIC-III Database
Jiayang Wang, Xiaoshuo Huang, Lin Yang, Jiao Li
Published: Jan. 25, 2021. Version: 1.0.0
Database Credentialed Access
Phenotype Annotations for Patient Notes in the MIMIC-III Database
Edward Moseley, Leo Anthony Celi, Joy Wu, Franck Dernoncourt
patient classification natural language processing
Published: March 5, 2020. Version: 1.20.03
Database Credentialed Access
NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data
Harlin Lee, Boyue Li, Yungui Huang, Yuejie Chi, Simon Lin
eeg ehr polysomnography pediatrics clinical decision support sleep disorders sleep study electronic health records ecg
Published: Oct. 27, 2021. Version: 3.1.0
Database Credentialed Access
NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data
Harlin Lee, Boyue Li, Yungui Huang, Yuejie Chi, Simon Lin
eeg ehr polysomnography pediatrics clinical decision support sleep disorders sleep study electronic health records ecg
Published: Oct. 27, 2021. Version: 3.1.0