Resources
74 results for "standard"
Software
Open Access
Digital Data Real-Time Ingestion Utility
We present a Python-based utility for real-time ingestion of digital physiological signals and study enrollment metadata into an Oracle database. The application combines filesystem event monitoring, a GUI data entry form, and thin-mode Oracle conne…
Database
Credentialed Access
MIMIC-IV-Ext-CLIF: MIMIC-IV in the Common Longitudinal ICU data Format (CLIF)
MIMIC-IV-Ext-CLIF is a derived dataset of MIMIC-IV v3.1, transformed into the Common Longitudinal ICU data Format (CLIF). CLIF is an open-source critical care data model developed by a consortium of more than 10 US academic medical centers to standa…
Database
Credentialed Access
MIMIC-IV-Ext-PE: Pulmonary Embolism Labels for CT Pulmonary Angiography Radiology Reports
Pulmonary embolism (PE) is a leading cause of preventable in-hospital mortality. Advances in diagnosis, risk stratification, and prevention can improve outcomes. Large, publicly available datasets are needed to move research forward but are lacking …
Database
Open Access
Brugada-HUCA: 12-Lead ECG Recordings for the Study of Brugada Syndrome
We present a novel dataset of 12-lead electrocardiogram (ECG) recordings developed to support the study and classification of Brugada syndrome, a rare but potentially fatal cardiac arrhythmia. The data were collected retrospectively from patients ev…
Database
Open Access
tOLIet: Single-lead Thigh-based Electrocardiography Using Polimeric Dry Electrodes
Our team previously introduced an innovative concept for an "invisible" Electrocardiography (ECG) system, incorporating electrodes and sensors into a toilet seat design to enable signal acquisition from the thighs. Building upon that work, we now pr…
Model
Credentialed Access
Fine-tuning foundational models to code diagnoses from veterinary health records
Veterinary medical records represent a large data resource for application to veterinary and One Health clinical research efforts. Use of the data is limited by interoperability challenges including inconsistent data formats and data siloing. Clinic…
Database
Credentialed Access
Lunguage: A Benchmark for Structured and Sequential Chest X-ray Interpretation
Radiology reports convey detailed clinical observations and capture diagnostic reasoning that evolves over time. However, existing evaluation methods are limited to single-report settings and rely on coarse metrics that fail to capture fine-grained …
fine-grained structured reports
attribute-level clinical reasoning
medical text structuring
longitudinal clinical reasoning
chest x-ray report parsing
medical information structuring
benchmark dataset for radiology report
medical information extraction
structured radiology reports
temporal relation extraction
radiology report benchmarking
longitudinal clinical understanding
Database
Credentialed Access
CXReasonBench: A Benchmark for Evaluating Structured Diagnostic Reasoning in Chest X-rays
Recent progress in Large Vision-Language Models (LVLMs) has enabled promising applications in medical tasks such as report generation and visual question answering. However, existing benchmarks focus mainly on the final diagnostic answer, offering l…
Database
Credentialed Access
RadVLM Instruction Dataset
We release the RadVLM instruction dataset, a large-scale resource used to train the RadVLM model on diverse radiology tasks. The dataset contains 1,115,021 image–instruction pairs spanning five task families: (i) report generation from frontal CXRs …
Database
Restricted Access
mcPHASES: A Dataset of Physiological, Hormonal, and Self-reported Events and Symptoms for Menstrual Health Tracking with Wearables
Individuals who menstruate are frequently led to believe that there is a standard menstrual cycle, typically characterized as 28 days in length with predictable and uniform patterns. This framing often emphasizes cycle dates as the only relevant met…