Resources


Database Credentialed Access

Medical-Diff-VQA: A Large-Scale Medical Dataset for Difference Visual Question Answering on Chest X-Ray Images

Xinyue Hu, Lin Gu, Qiyuan An, Mengliang Zhang, liangchen liu, Kazuma Kobayashi, Tatsuya Harada, Ronald Summers, Yingying Zhu

MIMIC-Diff-VQA provides a large-scale dataset for Difference visual question answering in medical chest x-ray images.

difference visual question answering difference vqa vqa chest x-ray visual question answering

Published: Feb. 3, 2025. Version: 1.0.1

Database Credentialed Access

Symile-MIMIC: a multimodal clinical dataset of chest X-rays, electrocardiograms, and blood labs from MIMIC-IV

Adriel Saporta, Aahlad Manas Puli, Mark Goldstein, Rajesh Ranganath

A multimodal clinical dataset consisting of CXRs, ECGs, and blood labs, designed to evaluate Symile, a simple contrastive loss that accommodates any number of modalities and allows any model to produce representations for each modality.

database cxr ecg chest x-ray mimic contrastive learning model multimodal electrocardiogram

Published: Jan. 28, 2025. Version: 1.0.0

Database Credentialed Access

FFA-IR: Towards an Explainable and Reliable Medical Report Generation Benchmark

Mingjie Li, Wenjia Cai, Rui Liu, Yuetian Weng, Tengfei Liu, Cong Wang, xin chen, zhong liu, Caineng Pan, Mengke Li, yingfeng zheng, Yizhi Liu, Flora Salim, Karin Verspoor, Xiaodan Liang, Xiaojun Chang

Benchmark dataset for report generation based on fundus fluorescein angiography images and reports.

fundus fluorescein angiography medical report generation vision and language explainable and reliable evaluation

Published: Jan. 21, 2025. Version: 1.1.0

Database Credentialed Access

Medical-CXR-VQA dataset: A Large-Scale LLM-Enhanced Medical Dataset for Visual Question Answering on Chest X-Ray Images

Xinyue Hu, Lin Gu, Kazuma Kobayashi, liangchen liu, Mengliang Zhang, Tatsuya Harada, Ronald Summers, Yingying Zhu

Medical-CXR-VQA provides a large-scale LLM-enhanced dataset for visual question answering in medical chest x-ray images.

Published: Jan. 21, 2025. Version: 1.0.0

Database Restricted Access

MIMIC-IV-Ext-DiReCT

Bowen Wang, Jiuyang Chang, Yiming Qian

A diagnostic reasoning dataset designed to evaluate the performance of large language models in aligning with human doctors when making diagnoses from clinical notes.

Published: Jan. 21, 2025. Version: 1.0.0

Database Credentialed Access

MS-CXR: Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing

Benedikt Boecking, Naoto Usuyama, Shruthi Bannur, Daniel Coelho de Castro, Anton Schwaighofer, Stephanie Hyland, Harshita Sharma, Maria Teodora Wetscherek, Tristan Naumann, Aditya Nori, Javier Alvarez Valle, Hoifung Poon, Ozan Oktay

MS-CXR is a new dataset containing 1162 chest X-ray bounding box labels paired with radiology text descriptions, annotated and verified by two board-certified radiologists.

vision-language processing chest x-ray phrase grounding localization

Published: Nov. 15, 2024. Version: 1.1.0

Model Credentialed Access

Shareable Artificial Intelligence to Extract Cancer Outcomes from Electronic Health Records for Precision Oncology Research

Kenneth Kehl, Pavel Trukhanov, Christopher Fong, Justin Jee, Karl Pichotta, Morgan Paul, Chelsea Nichols, Michele Waters, Nikolaus Schultz, Deborah Schrag

The DFCI-imaging-student and DFCI-medonc-student AI models for extracting cancer outcomes from imaging reports and medical oncologist notes from electronic health records.

Published: Oct. 24, 2024. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-MDS-ED: Multimodal Decision Support in the Emergency Department - a Benchmark Dataset for Diagnoses and Deterioration Prediction in Emergency Medicine

Juan Miguel Lopez Alcaraz, Nils Strodthoff

MIMIC-IV-ext-MDS-ED proposes a dataset to benchmark multimodal decision support in the emergency department. It features multimodal input (including ECG waveforms) and a comprehensive set of prediction targets (diagnoses and deterioration prediction)

emergency department ecg benchmark diagnoses prediction deterioration prediction multimodal

Published: Sept. 12, 2024. Version: 1.0.0

Database Open Access

Brno University of Technology Smartphone PPG Database (BUT PPG)

Andrea Nemcova, Radovan Smisek, Eniko Vargova, Lucie Maršánová, Martin Vitek, Lukas Smital, Marina Filipenska, Pavlina Sikorova, Pavel Gálík

BUT PPG is a database created for the purpose of evaluating PPG signal quality and estimation of heart rate. The data comprises 3,888 10s recordings of PPGs recorded by smartphone and associated ECG and ACC signals and annotations.

heart rate artificial intelligence ppg ecg acc signal quality assessment annotations accelerometric data photoplethysmography electrocardiogram

Published: Aug. 23, 2024. Version: 2.0.0

Database Credentialed Access

ReXPref-Prior: A MIMIC-CXR Preference Dataset for Reducing Hallucinated Prior Exams in Radiology Report Generation

Oishi Banerjee, Hong-Yu Zhou, Subathra Adithan, Stephen Kwak, Kay Wu, Pranav Rajpurkar

We propose ReXPref-Prior, an adapted version of MIMIC-CXR where GPT-4 has removed references to prior exams from both findings and impression sections of chest X-ray reports.

chest x-rays reinforcement learning hallucination

Published: Aug. 14, 2024. Version: 1.0.0