Resources


Database Credentialed Access

MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation

Philip Chung, Akshay Swaminathan, Alex Goodell, Yeasul Kim, Momsen Reincke, Lichy Han, Ben Deverett, Mohammad Amin Sadeghi, Abdel badih El Ariss, Marc Ghanem, David Seong, Andrew Lee, Caitlin Coombes, Brad Bradshaw, Mahir Sufian, Hyo Jung Hong, Teresa Nguyen, Mohammad Rasouli, Komal Kamra, Mark Burbridge, James McAvoy, Roya Saffary, Stephen Parnell Ma, Dev Dash, James Xie, Ellen Wang, Cliff Schmiesing, Nigam Shah, Nima Aghaeepour

A clinician-labeled dataset for fact-checking long-form clinical text against patient EHRs. The dataset contains LLM-written and human-written Brief Hospital Course summaries decomposed to atomic claim and sentence propositions with annotations.

artificial intelligence clinical notes natural language processing large language models brief hospital course electronic health records long-form text chart review text reranking atomic claim hybrid retrieval clinical informatics clinical medicine fact verification retrieval-augmented generation logical atomism text embedding formal logic llm-as-a-judge llm evaluation

Published: April 9, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation

Philip Chung, Akshay Swaminathan, Alex Goodell, Yeasul Kim, Momsen Reincke, Lichy Han, Ben Deverett, Mohammad Amin Sadeghi, Abdel badih El Ariss, Marc Ghanem, David Seong, Andrew Lee, Caitlin Coombes, Brad Bradshaw, Mahir Sufian, Hyo Jung Hong, Teresa Nguyen, Mohammad Rasouli, Komal Kamra, Mark Burbridge, James McAvoy, Roya Saffary, Stephen Parnell Ma, Dev Dash, James Xie, Ellen Wang, Cliff Schmiesing, Nigam Shah, Nima Aghaeepour

A clinician-labeled dataset for fact-checking long-form clinical text against patient EHRs. The dataset contains LLM-written and human-written Brief Hospital Course summaries decomposed to atomic claim and sentence propositions with annotations.

artificial intelligence clinical notes natural language processing large language models brief hospital course electronic health records long-form text chart review text reranking atomic claim hybrid retrieval clinical informatics clinical medicine fact verification retrieval-augmented generation logical atomism text embedding formal logic llm-as-a-judge llm evaluation

Published: April 9, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-BHC: Labeled Clinical Notes Dataset for Hospital Course Summarization

Asad Aali, Dave Van Veen, Yamin Arefeen, Jason Hom, Christian Bluethgen, Eduardo Pontes Reis, Sergios Gatidis, Namuun Clifford, Joseph Daws, Arash Tehrani, Jangwon Kim, Akshay Chaudhari

This dataset presents a collection of preprocessed and labeled clinical notes derived from "MIMIC-IV-Note", and aims to facilitate the development of ML models focused on summarizing brief hospital courses (BHC) from clinical notes.

clinical notes natural language processing machine learning brief hospital course text summarization

Published: Feb. 3, 2025. Version: 1.2.0

Database Credentialed Access

MIMIC-IV-Ext-BHC: Labeled Clinical Notes Dataset for Hospital Course Summarization

Asad Aali, Dave Van Veen, Yamin Arefeen, Jason Hom, Christian Bluethgen, Eduardo Pontes Reis, Sergios Gatidis, Namuun Clifford, Joseph Daws, Arash Tehrani, Jangwon Kim, Akshay Chaudhari

This dataset presents a collection of preprocessed and labeled clinical notes derived from "MIMIC-IV-Note", and aims to facilitate the development of ML models focused on summarizing brief hospital courses (BHC) from clinical notes.

clinical notes natural language processing machine learning brief hospital course text summarization

Published: Feb. 3, 2025. Version: 1.2.0

Database Credentialed Access

Medical Expert Annotations of Unsupported Facts in Doctor-Written and LLM-Generated Patient Summaries

Stefan Hegselmann, Shannon Shen, Florian Gierse, Monica Agrawal, David Sontag, Xiaoyi Jiang

Annotations for unsupported facts in 100 original MIMIC patient summaries (discharge instructions) and hallucinations in 100 Large Language Model (LLM) generated patient summaries labeled by two medical experts.

Published: April 30, 2025. Version: 1.0.1

Challenge Credentialed Access

Discharge Me: BioNLP ACL'24 Shared Task on Streamlining Discharge Documentation

Justin Xu

Data for the "Discharge Me!" Shared Task on Streamlining Discharge Documentation for BioNLP ACL'24

generation bionlp acl discharge summary

Published: April 12, 2024. Version: 1.3